| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4810 |
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| Symbol | |
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| ID | 5750413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5308363 |
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| End bp | 5309631 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641299926 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001565824 |
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| Protein GI | 160900242 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.422272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCCT CGATTCGCCA TTTCCCGTGG GCCGGCCCGG CCCTGCTGTG CACCCTGCTG
GGCAGCGGCG GCCTGGCCTG GGCGCTGCCG GGAAGCGGCC CGGCCAACGG GCAGTCGGCA
GGGGCTTCCG CTGCGGCGGC TGTACCCGGT ACGGCCGCTG CGCCCGCTGC ACCCGCTGCA
CCTGCTGCTC CCGGTACAGC CGATGCGCCC CTGGTGGTGC GCATTGCCCA TGCGGGGCCG
GTGTCCGGCC CCATCGCCAG CCTGGGCAAG GATGAGGAAA ACGGCGTGCG CATGGCCCTG
GACGATCTCA ACGCCAAGGG GCTGGAGATC GGCGGGCGCA AGTTGCGCTG GAAGCTGGAG
GCCGGCGACG ATGGCGGCGA CCCCGGCCAG GCCGTGGCCC TGGCCCGGCG CCTGTGCGAC
AAGAAGGTGG CGGCCGTGGT CGGCCACCTG CAGTCGGGCA CCACGCTGCC GGCCACATCC
ATCTACCACG ACTGCGGCAT CGTCATGGTC ACGCCCGCAG CCAGCAACCC GGCCATCACC
CAGGCGGGCT ACGACACCAC CTACCGCGTG ATCGCCGACG ACCGCGCCAT GGTCGATGCG
CTGGTCGCGC ACGCCGTGGG CAAGCTGGGC GTCAAGCGCG CGGCCATCAT CGATGACCGC
TCGGCCTACG GCCAGGGCAT CGTGGCGCTG TTCGAGGCCG AGGCGCGCGA GCAGGGCATC
GAGATCGTGG ACAAGCAGTT CACCGGCGAC AAGGCCACCG ACTTCGTGCC CATCCTCACC
GCCATCAAGG GCAAGAAGCC GGACGCCATC TTCTTCGGCG GCCTGGACGC CCAGGCCGGC
CCCATGCTCA GGCAGATGGC CCAGCTGGCC ATGGACAAGG TGCGCCTGCT GGGCGGCGAC
GGCCTGTGCA CGCTGCGCCT GCCCGAGCTG GCCGGCAACA CGTCCCCGCT GCGCAATGTG
ACCTGCGCCG TGGGCGGCAG CCCGCTGGAG CGCATGCCGG GCGGCGCTGC CTGGAAGCAG
CGCTACGACC AGCGCTTTCC CGACCAGTAC CAGGTCTTCA GCCCCTACGC CTACGACGCC
ACCATGGTGC TGGCCCAGGC CATGCTGCGG GCCGACTCCA TCCGGCCCGA TGCCTATATC
CCCTATCTGC GCCAGACCCG GCATGACGGC GTGACGGCGC CGATTGCCTT CACGCCCCAG
GGCGAGCTGC AGGCGCCGGT CGTCACGCTC TACCACTATG CGCAGGGCGT GCGCAAGCCG
CTTCCCTGA
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| Protein sequence | MHASIRHFPW AGPALLCTLL GSGGLAWALP GSGPANGQSA GASAAAAVPG TAAAPAAPAA
PAAPGTADAP LVVRIAHAGP VSGPIASLGK DEENGVRMAL DDLNAKGLEI GGRKLRWKLE
AGDDGGDPGQ AVALARRLCD KKVAAVVGHL QSGTTLPATS IYHDCGIVMV TPAASNPAIT
QAGYDTTYRV IADDRAMVDA LVAHAVGKLG VKRAAIIDDR SAYGQGIVAL FEAEAREQGI
EIVDKQFTGD KATDFVPILT AIKGKKPDAI FFGGLDAQAG PMLRQMAQLA MDKVRLLGGD
GLCTLRLPEL AGNTSPLRNV TCAVGGSPLE RMPGGAAWKQ RYDQRFPDQY QVFSPYAYDA
TMVLAQAMLR ADSIRPDAYI PYLRQTRHDG VTAPIAFTPQ GELQAPVVTL YHYAQGVRKP
LP
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