| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4809 |
|---|
| Symbol | |
|---|
| ID | 5750412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 5306967 |
|---|
| End bp | 5308394 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641299925 |
|---|
| Product | CMP/dCMP deaminase zinc-binding |
|---|
| Protein accession | YP_001565823 |
|---|
| Protein GI | 160900241 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG0590] Cytosine/adenosine deaminases
[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.779004 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGGG CGTGCGCAAG CCGCTTCCCT GACCCCCAGT CGCCCGGACA CCGTGACACC
TTGACTGCCG AGCACCGTCC ACTGCCGCAG GCCGACGACG AGGCCTGGAT GCGCGCCGCC
CTGGAGCTGG CGCGCGCCGC CGCCCAGGCG GGCGAGGTGC CCGTGGGCGC CGTCATCGTC
AAGGACGGCG CCATCGTCGG CCAGGGCCGC AATGCGCCCG TGGCCCAGGG CGACCCCACG
GCCCATGCCG AGGTGCTGGC GCTGCGCGAC GCGGCCGCGC GCCTGGGCAA CTACCGGTTG
GACGATTGCA CGCTCTACGT GACCCTGGAG CCCTGCACCA TGTGCAGCGG CGCCATGCTG
CATGCGCGCC TGGGCCGCGT GGTCTATGGC GCGGCCGAGC CGCGCACGGG CGCGGCCGGA
TCGGTGCTGG ACGTGTTTGC GCTGCCGCAG ATCAACCACC ACACGCAGGT GACGCGCGGC
GTGCTGGCCG GCGAATGCGC GGCCCTGATG TCGGACTTCT TTCGCACGCG CCGCGCCGAG
CAGCGCGCGG CCCAGCCGCA TCCGCTCAAG GACACGGCGC TGCGCCATGC GGATTCCACC
TTCGGCGGCT TTGCCCAGCC GCAGTGGCGC AGCGATCTGC CGGCGCTGGC AGGCCTGCGC
CTGGCCGTGG TCGATGAAGG ACCGCATGAT GCACCGCTGA CCTGGCTGTG CCTGCACGGC
AGCCCCTCAT GGGGCCAGCT GTTCCAGCCC ATGCTGCCCG GCTGGCTCCA GGCCGGCCAT
CGCGTGGTGG TCCCCGACCT GCCTGGCTTT GGCCGCAGCG ACCAGCCCAA GAAGGAGAAG
GCGCACAGCG CGGCCTGGCA TGTGCAAGTG CTGCGCGAGC TGGTGCTGGC GCTGGACCTG
CGGAGCGTCG TGCTGGTCGG CCATGACGAT GGCGCGCGCC TGGGGCTGGC CGTGGCGCAG
GCCGAGCCCG CACGTTTTTG CGGCGCCTGG CTCATGAATG CCTGGCCCGC AGGCCCGGCG
CCCGATGCCT GCGTGCAATG GTTTGCGCAG GCGGCGCGCA AGCCGTCATG GCCCGTGGGC
CGCGCCATGC ACGAGGCGGG TGAGGAGGCC GGTGCACAGC CGCAGGCCTG GAACCTGCCG
TTTTCCCAAC CCGGCCACCG CGCCGCGCTG CAGGCATGGC CCCGGGTGCA GGCCGAAATG
CCGGCCCTGC CGATGGAGTT GCTGGTGCAG TGGAGCCAAC AGCAGCGCCT GTGGGTCCAG
GGCGGCGAGC ACGATGCGCT GATGCCTGCG CCCGCATGGC GCCATGCCTG GCTGCAGGCG
CTGCCACAGC TGCCGCCAGC GCAGCTGCGC CTATCCCCGT GCGGCCATTG GGTTCCCCTG
TGCGCTGCCG GCATGGTGGC CGACGCTGTG GAATACTTCC GCCCGTAG
|
|---|
| Protein sequence | MRRACASRFP DPQSPGHRDT LTAEHRPLPQ ADDEAWMRAA LELARAAAQA GEVPVGAVIV
KDGAIVGQGR NAPVAQGDPT AHAEVLALRD AAARLGNYRL DDCTLYVTLE PCTMCSGAML
HARLGRVVYG AAEPRTGAAG SVLDVFALPQ INHHTQVTRG VLAGECAALM SDFFRTRRAE
QRAAQPHPLK DTALRHADST FGGFAQPQWR SDLPALAGLR LAVVDEGPHD APLTWLCLHG
SPSWGQLFQP MLPGWLQAGH RVVVPDLPGF GRSDQPKKEK AHSAAWHVQV LRELVLALDL
RSVVLVGHDD GARLGLAVAQ AEPARFCGAW LMNAWPAGPA PDACVQWFAQ AARKPSWPVG
RAMHEAGEEA GAQPQAWNLP FSQPGHRAAL QAWPRVQAEM PALPMELLVQ WSQQQRLWVQ
GGEHDALMPA PAWRHAWLQA LPQLPPAQLR LSPCGHWVPL CAAGMVADAV EYFRP
|
|---|
| |