Gene Daci_4805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4805 
Symbol 
ID5750408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5301641 
End bp5304175 
Gene Length2535 bp 
Protein Length844 aa 
Translation table11 
GC content71% 
IMG OID641299921 
Productpeptidase S45 penicillin amidase 
Protein accessionYP_001565819 
Protein GI160900237 
COG category[R] General function prediction only 
COG ID[COG2366] Protein related to penicillin acylase 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAATCA TGCGAATCCT GAACTCGCGG TGGTGGGGTG TGGGCGCCGT GGCGGTGGTC 
GGCTCGGCCC TGCTGGCCGG CAGCGCGCTG GCCATCTATG CCGTGCGCGT GCAGCCGGTG
CTTGACGGAC AGCTCACGCT GGCCGGGCTG GAGCAGCCCG TGCGCGTGCG GCGCGATGAT
GCCGACATCA CCCATATCAG CGCCTTCTCG CCGCAGGACC TGTGGCGTGC CCTGGGCCAT
GTGCATGCAC AGGAGCGCGG CTGGCAGCTG GAGTTCAACC GCCGCCTGAT GCACGGCACG
CTGTCCGAGA TCCTCGGGCC GGCCACGCTG GACACCGACA AGCTCATGCG CGCGCTGGAC
ATACGCGGCG CGGCGCGGCG CCAGTACGCA TCCCTGCCCG CCAACGCGCG CGAGGCGCTG
CAGGCCTACA GCGAAGGCAT CGCGGCCTTT TACGCGGCCC TGCCCATGCG CCAGCACCCG
CAGGTGCCCG AGTTCATGCT GCTGGACACG TCGCCGGGCG GCGGCGACAA CTCGGCCTGG
GCGCCCGAGG ACAGCGTGGG CTGGGCGCTG ATGATGGCGC TGGACCTGGG CGGCAACTGG
GGCAACGAAT TCGCGCGGCT GGCCGCGCTC TCGCAACTGG ACACACAGCA GCTGTGGCAG
CTGATGCCGC CTTATCCCGG CGAGGCGCCG GCCACCTCCA CCGACCTTGC GGCCCTCTAC
CGAGGTCTGG GCGTGTACCG CCAGGAGGCA CAGACTGCGT CTGCGCCCAA GGTGGCTGCC
GCCGGCGAGG CGAGCGATGC CTGGGCCCGC TGGTCCCGCG ACATGGTGCG CGATGCGGGC
ACCAACGACG GCAAGGGCAG CAACAACTGG GTGCTGTCGG GCAGCCGCAC GGCCAGCGGC
AAGCCGCTGC TGGCCAACGA TCCCCATCTG GGCCTGAGCG CGCCCGCCAT CTGGTACTAC
GCGCGCCTGC AGTCGCCCGC CGGCCAGGCG CAGGACGGCA CGCCGCTGTC GCCCATCGAC
GTGGTGGGGG CCACCCTGCC GGGCCTGCCC TTCGTGGTGC TGGGGCGCAC GCGCGAGGTG
GCCTGGGGCT TTACCAACAC GAATCCCGAT GTGCAGGATC TGTACCTGGA GCAGATCGAT
CCAGGCAACC CGGGCCGCTA CCGCACGCCG GACGGCTGGG CGCCTTTCAC CGAGCGCAGC
GAGCGCATCA GGGTCAAGGG CCGGGCCGAT GTGCAGCTCA CGCTGCGCAG CACGCGCCAC
GGCCCTGTGA TCAGCGATGT GCAGCCCCAG TACGAGGCCG TGCTCGACAA GCGCCGCTAC
GCCGTGGCCC TGCGCTGGGC CGCGCTGGAC ACCGACAACC TCACCGTGCA GGCGGGCCTG
CGGGCCAACG AGGCGCGCAG CGTGGCCCAG CTGTTCGAGG CCTTTGCCGA CTACCACTCG
CCCATGCAGA GCATCGTCGC GGCCGATGTG CATGGCGCCA TCGGCTTCAA GGCCGCAGGC
CGGGTGCCGC TGCGGGCGGC CGACAACGAC CTGCGCGGCG TGGCGCCCGC ACCGGGCTGG
GAGGCACGCT ACGACTGGCA GGGCTGGCTG CCCTACGACC AGGCACCGCA GGACGATGGA
ACGGCGCTGG GCTATCTGGC CACCGCCAAC CAGCGCATCA CGCGCGAGGG CTATGCCCAC
TTCCTCACCC AGGACTGGAG CCTGCCGTAC CGGCACCGCC GCATCTCCGA GCTCATCGAG
GCGAAGGACA GGCACGACAT GGTCAGCATG GCCTCCATCC AGAACGACCA GACCTCGCTG
GCCGCCCGCG CCCTGCTGCC GCAAATGCTC AAGGCCCTGG ACGAAGCGCC GGCCACACAT
CCGCTGGCCC CGCAGGCGCG CCGGGTGATG GCGCAGTTCG ACGGCCGCAT GGATGCCGCG
CAGGCCGCGC CCCTGATCTT TGCCGCCTGG GTGGACGAAC TGACGCGCGG CCTGGTGATC
CCGCGCATTG GCGCCCAGAC CTTTGCGGCC ACCTATGGCA AGCGCGACTA CCGCGCAGGC
ATCGAAGGCA TGCTGGAACG CCGCGACGGC TGGTGGTGCG CGGCTGCAGG CTGCAGTGCC
CAGGTCAGCC AGGCGCTGGA CCGGGCGCTG GTGCGCCTGC AGTCCATGCA GGGCAGCGTC
CTGGGCCGCT GGCGCTGGGG CACGGCGCAT GCGGCCCTGA GCAGCCATCG GCCGCTGGGC
AGCGTGGGGC TGCTGGCGGG CATCTTCAAT GTCAGCGTGC CTTCGGGCGG TGACAGCTAC
ACCGTCAACG TGGGACAGTA CCTGCCCGGT GATGCCAGGG CGCCGTTCGC CAACCGCCAT
GCGGCATCGC TGCGCGCCAT CTACGACCTG GCCGAGCCCG AGCGCTCGCT GTTCATCTAC
CAGACCGGAC AAAGCGGCGT GGCCCTGTCC AGCCGCTATG CGGACATGTC TGCCGAATGG
GCCGACGGCC GCTACCGGCC GCTGCAGATG GCGCCCGCGC GCTGGCGCCA TTCCATGATG
CTGCGGCCGC AGTAG
 
Protein sequence
MGIMRILNSR WWGVGAVAVV GSALLAGSAL AIYAVRVQPV LDGQLTLAGL EQPVRVRRDD 
ADITHISAFS PQDLWRALGH VHAQERGWQL EFNRRLMHGT LSEILGPATL DTDKLMRALD
IRGAARRQYA SLPANAREAL QAYSEGIAAF YAALPMRQHP QVPEFMLLDT SPGGGDNSAW
APEDSVGWAL MMALDLGGNW GNEFARLAAL SQLDTQQLWQ LMPPYPGEAP ATSTDLAALY
RGLGVYRQEA QTASAPKVAA AGEASDAWAR WSRDMVRDAG TNDGKGSNNW VLSGSRTASG
KPLLANDPHL GLSAPAIWYY ARLQSPAGQA QDGTPLSPID VVGATLPGLP FVVLGRTREV
AWGFTNTNPD VQDLYLEQID PGNPGRYRTP DGWAPFTERS ERIRVKGRAD VQLTLRSTRH
GPVISDVQPQ YEAVLDKRRY AVALRWAALD TDNLTVQAGL RANEARSVAQ LFEAFADYHS
PMQSIVAADV HGAIGFKAAG RVPLRAADND LRGVAPAPGW EARYDWQGWL PYDQAPQDDG
TALGYLATAN QRITREGYAH FLTQDWSLPY RHRRISELIE AKDRHDMVSM ASIQNDQTSL
AARALLPQML KALDEAPATH PLAPQARRVM AQFDGRMDAA QAAPLIFAAW VDELTRGLVI
PRIGAQTFAA TYGKRDYRAG IEGMLERRDG WWCAAAGCSA QVSQALDRAL VRLQSMQGSV
LGRWRWGTAH AALSSHRPLG SVGLLAGIFN VSVPSGGDSY TVNVGQYLPG DARAPFANRH
AASLRAIYDL AEPERSLFIY QTGQSGVALS SRYADMSAEW ADGRYRPLQM APARWRHSMM
LRPQ