Gene Daci_4772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4772 
Symbol 
ID5750375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5268663 
End bp5269985 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content68% 
IMG OID641299888 
ProductFolC bifunctional protein 
Protein accessionYP_001565786 
Protein GI160900204 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0285] Folylpolyglutamate synthase 
TIGRFAM ID[TIGR01499] folylpolyglutamate synthase/dihydrofolate synthase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.16317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACCT CATTTCCCAC ATTGGATGCA TGGCTCGCAT ATTGCGAGCG CCTGCACCCC 
AAGAATATCG CGCTGGGCCT GGATCGCGTG CGCGAAGTCG CCCAGCGCCT GGACCTGCGT
TTCGACTGCC CCGTGATCAC GGTGGCGGGC ACCAATGGCA AGGGCTCGAC CTGCGCCATG
CTGGAGGCCG TGGCGCTGCA GTCGGGCTTT CGCCCCGGCG TCTACACATC GCCGCATCTG
GTGCATTTCG AGGAGCGCTG CCGCGTGGGC GGCGAGATCG TGAAGGCCGC CGAGCTGCTG
CCGCACTTCG AGGCCGTGGA GCAGGCGCGC GTGCAGGGCA CGGAAGTGGC GCTCACCTAT
TTCGAATTCA CCACGCTGGC CATCCTGCGG CTGATGAGCC AGTCCAGGCT GGATGTGGCG
ATTCTCGAGG TGGGCCTGGG CGGGAGGCTG GATGCCACGA ACGTGATCGA CGCCGATTGC
GCCGTCATCA CCAGCATCGA CATCGACCAT GTGGAGTTCC TGGGCCCGGA CCGCGAGAGC
ATCGGCCGCG AGAAGGCCGG CATCATGCGC GCCGGTCGGC CGGTGGTGGT CAGCGATCCC
ATGCCGCCGC AAAGCGTGCT GGACCATGCA CAGGCCATTG GCGCCGATCT CTGGCGCCTG
GGCCAGGACT TCAACTTCTC GGGCGACAAG CAGCAGTGGG GCTGGGCAGG ACGCGGGCGG
CGCTATGCGG GCCTGGCCTA TCCGGCGCTG CGCGGCGCCA ACCAGCTGGT CAATGCATCG
GGTGCGCTGG CCGCGCTCGA AGCCATTCGC AGCCGCCTTC CGGTCACGGC CCAGGCCGTG
CGCACGGGGC TGGCCATGGT CGAGCTGCCG GGGCGTTTCC AGATCATTCC GGGCCAGCCC
ACGCTGGTGC TGGACGTAGC GCACAACCCG CATTCGGTGG CGGCGCTGAC GGCCAACCTC
GACGCCATGG GCTACTTCCC CTGCACGCAT GCGGTGTTCG GCGCCATGCA CGACAAGGAC
CTGGCGCCCA TGCTGGGCAG GATCGCACCG CTGATCGACC GCTGGTACCT GACCGACCTG
CCCACGCCGC GTGCCGAAAG CGCCGAAGTG CTGCGCCAGA AGATCGAAGC CCTGCCGCCC
GCGCCCGGCG TGCCCCGCGA GCTGTCGGTG GCCACCTTCG CAAACCCGCA GCTGGCGCTG
GATGCAGCGG TTCTGGCCGC AGGTCCCACT GATAGAATCG TGGTCTTTGG CTCGTTCTTC
ACGGTGGGCG GCGTGCTGCA GGACGGCCCG CCCCGGCTGA ACGCCAAGCA TCTGGGCACC
TGA
 
Protein sequence
MHTSFPTLDA WLAYCERLHP KNIALGLDRV REVAQRLDLR FDCPVITVAG TNGKGSTCAM 
LEAVALQSGF RPGVYTSPHL VHFEERCRVG GEIVKAAELL PHFEAVEQAR VQGTEVALTY
FEFTTLAILR LMSQSRLDVA ILEVGLGGRL DATNVIDADC AVITSIDIDH VEFLGPDRES
IGREKAGIMR AGRPVVVSDP MPPQSVLDHA QAIGADLWRL GQDFNFSGDK QQWGWAGRGR
RYAGLAYPAL RGANQLVNAS GALAALEAIR SRLPVTAQAV RTGLAMVELP GRFQIIPGQP
TLVLDVAHNP HSVAALTANL DAMGYFPCTH AVFGAMHDKD LAPMLGRIAP LIDRWYLTDL
PTPRAESAEV LRQKIEALPP APGVPRELSV ATFANPQLAL DAAVLAAGPT DRIVVFGSFF
TVGGVLQDGP PRLNAKHLGT