Gene Daci_4749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4749 
Symbol 
ID5750341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5205729 
End bp5207027 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content66% 
IMG OID641299854 
ProductL-lysine 6-monooxygenase (NADPH) 
Protein accessionYP_001565763 
Protein GI160900181 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3486] Lysine/ornithine N-monooxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.827287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.49584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACCC ACCCGCTGAT CGGCATCGGC TTCGGCCCCT CCAACATTGC CCTGGCCATC 
GCCCTCAAGG AGCGCGAAAC CGCCGCGCGG GCCATGCACC CCGTCTTCAT CGAAAAGCAG
CCGCGCTTCG CCTGGCACCG GGACATGCTG CTGGAGCAGG CCCACATGCA GGTGTCCTTC
CTCAAGGACC TGGCCACGCT GCGCAACCCC ACCAGCCGCT TCACCTTCAT CAACTACCTG
CACGAGAAGG GCCGGCTGCA GGACTTCATC AACCTCAAGA CCTTCTTTCC CAGCCGCCAC
GAATTCAACG ACTACCTGGC CTGGGCCGCC TCCAAGTTCG AGGACCGCTG CGTCTACGGC
CAGGAAGTCA TCGAGGTGCT GCCTGAAAAA CGCGACGGCA AGGTGGAGCT GCTGCGCGTG
CGCTCGCGCG ATGCGGCCGG CAACGTGCAT GAGCGCCTGG GACAGAACCT GGTCATGAGC
ATCGGCGGCA CGCCCAGCAT TCCCGAGCAG TTCAAGCCCC TGCGCGGCGA CGCGCGCGTC
TTCCACTCCA GTGCCTACCT GCGCAGCATT GCCGAGCATG CCCGGCCGCT GCGCATCGCC
GTGGTCGGTG CGGGCCAAAG CGCAGCGGAA ATCTTCATGG ACCTGCACGG CCGCTACGCC
GCCGCCGAGA TCGACCTGGT CATGCGCGCC CGCTCCATCC GCCCCTCGGA CGACAGCCCC
TTCGTCAACG AAATCTTCAA CGCCGACTTC GTGGACCATG TCTACAGCCG CCCGCACGAC
GAGCGCGGCG CCCTGCTGCG CGAGTTCTGG CACACCAACT ACGCCTGTCC CGACCTGGAG
CTGATCGAGA GCATCTTCAA GGTGTTCTAT GAACAGAAGG TCGTCGGCGA CACGCGCCAC
CGCTTCCTGC GCCGCCACGA GGTGCAGGAC GTGCGCGCCG CCAGCGACGG CATCCACCTG
GGGCTGCGCG ATCTCAACAG CGGCATCGAC CATGCATCGC GCTACGACGT GGTGGTGCTG
GCCACCGGCT ATGCGCGCGA GCACCACAAG ACCCTGCTGG ACCCGCTGGC CCCCTACCTG
GGCGACTTCT CCGTGAGCCG CGACTACCAG GTGCACACCA CGCCGGACTT TCGCCCCGCC
ATCTTCCTGC AGGGCGCCTG CGAGGGCTCC CACGGCCTCA GCGACACCCT GCTGTCCGTC
ACTTCGGTGC GCACCGGCGA AATCGGTGAA GCCCTGCTGG CAGCGCAAGC CCAAAGACCC
GATGTTGCGC GCACAGAACA GCTGGCGCTG CAGGACTGA
 
Protein sequence
MQTHPLIGIG FGPSNIALAI ALKERETAAR AMHPVFIEKQ PRFAWHRDML LEQAHMQVSF 
LKDLATLRNP TSRFTFINYL HEKGRLQDFI NLKTFFPSRH EFNDYLAWAA SKFEDRCVYG
QEVIEVLPEK RDGKVELLRV RSRDAAGNVH ERLGQNLVMS IGGTPSIPEQ FKPLRGDARV
FHSSAYLRSI AEHARPLRIA VVGAGQSAAE IFMDLHGRYA AAEIDLVMRA RSIRPSDDSP
FVNEIFNADF VDHVYSRPHD ERGALLREFW HTNYACPDLE LIESIFKVFY EQKVVGDTRH
RFLRRHEVQD VRAASDGIHL GLRDLNSGID HASRYDVVVL ATGYAREHHK TLLDPLAPYL
GDFSVSRDYQ VHTTPDFRPA IFLQGACEGS HGLSDTLLSV TSVRTGEIGE ALLAAQAQRP
DVARTEQLAL QD