Gene Daci_4748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4748 
Symbol 
ID5750340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5204515 
End bp5205717 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content69% 
IMG OID641299853 
Producthypothetical protein 
Protein accessionYP_001565762 
Protein GI160900180 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.586037 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCTTG TGTCCCTTGT GCCCCTTGTG CCCTTGCCCG AGCCCCCACC CGTGTCCCGC 
ACGCGGGGCA CTCCATCTGA AAGAGTCCAC GTGCGTCCAG TCGAAGCCAC CGCTACACCG
TCACCAGACG CCTCCGGCGC CAGCTACCTT GCCCATGCAG GCGCCGAGAC GACCACCGTC
TTCGTCGATG GACAGCGGCT GCGCCTGGAA CGTTCGGGGT CCGTGGATGC CGGCAGGCCC
GGCAAGCACA GTCTCTGGAA CCTGTCGCCC ACGGCCGCGC CAGGCCTGAT GCAGCTGCAA
TGGCTGGGCC CCTGCTCGGG CATGCCCGAA GCGGATGAAC TGCTGGCCGC ACTGCAGGCC
GGCTTTGGCC TGCATCCCGA TGCGCAAGCC ATCGAGCTGT CCCTGCCCCG GCTGCCGCCC
GGCCTGCGCG ACAGCATTGC CACAGTGCAG CCGGGCCAGG CCCCGTGCGT GGCAAGAAGC
GTGCTGTGGC AGCAGCCCCT GTGGCTGCCC CGCCCGCGCC CACCCTATGC GCTGCACTAC
ACGATCAGCG AAGGCCGGCG CCACCCCGTG CGCCTGCACA AGCCGCGCGG CGAGGTCTAC
CGCCGCTTCA TCCCCTGGCT GGGCCGCACG CTGAGCTTTC GCACCGTGGA GCCCGAGGCC
GACCTGCCCC TCATCCACCG CTGGATGAAC GACCCGGTCG TCGCGCATTT CTGGGAGGAA
AGCGGCGACC TTGCCCACCA CCGCGCCTAC CTGCAGCGCA TGGCCGGCGA CCCGCATGCG
CTCGGCCTCA TCGGCTGCTT CGACGGCGAG CCCTTCGGCT ACTTCGAGGC CTACTGGGCC
AAGGAAGACC GCATCGCCCC CTTCTATGAC GCGGGCGACC ATGACCGGGG CTGGCATGCG
CTGGTAGGTG AGGCACGGTT TCGCGGCCAG CCCTACCTGA CGGCCTGGCT GCCCTCGCTG
TCGCACTACC TCTTTCTGGA CGACTGCCGC ACGCAGCGCA TCGTCGTGGA GCCGCGCGCC
GACAACCGCA AGATGCGCAA AAGCCTGCCG CGCTGCGGCT ATGCGCTGGT CAAGGAATTC
GACTTCCCGC ACAAGCGCGC CGTGCTGGGA GTCCTGCTCA GGGAACGCTT TTTCGCAGAC
GCCTTGTGGA TACCGCAGAC CGACGCAGCC GCGCCGGACG CACTGGACGC ATCGACCCAA
TGA
 
Protein sequence
MSLVSLVPLV PLPEPPPVSR TRGTPSERVH VRPVEATATP SPDASGASYL AHAGAETTTV 
FVDGQRLRLE RSGSVDAGRP GKHSLWNLSP TAAPGLMQLQ WLGPCSGMPE ADELLAALQA
GFGLHPDAQA IELSLPRLPP GLRDSIATVQ PGQAPCVARS VLWQQPLWLP RPRPPYALHY
TISEGRRHPV RLHKPRGEVY RRFIPWLGRT LSFRTVEPEA DLPLIHRWMN DPVVAHFWEE
SGDLAHHRAY LQRMAGDPHA LGLIGCFDGE PFGYFEAYWA KEDRIAPFYD AGDHDRGWHA
LVGEARFRGQ PYLTAWLPSL SHYLFLDDCR TQRIVVEPRA DNRKMRKSLP RCGYALVKEF
DFPHKRAVLG VLLRERFFAD ALWIPQTDAA APDALDASTQ