| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4746 |
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| Symbol | |
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| ID | 5750338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5201529 |
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| End bp | 5203244 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641299851 |
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| Product | cyclic peptide transporter |
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| Protein accession | YP_001565760 |
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| Protein GI | 160900178 |
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| COG category | [P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.235902 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACG CCAGCCGACC GCCCTCCGAG GTACTGCGCC TGCTCAAGCC CTTCCTGCCG
TGGATGGCGC TGTCCGTGGT CACGGGCATT TGCGCGGGTG GGGCCACGGT GGCGCTGCTG
GCGACCATCA ACCAGGTGCT CAACCGTCCC GGTGGGCTGG CGGGCGGGCT GCTGCTGACC
TTCATCGCCC TGTGTGCCAC CGTGCTGGTG TGCCGGGCCA CGTCCGACAT GTCGGGCAAT
TTCGTGGGGC AGCGCCTGGT GGCGCAGCTG CGCAAGGAAC TGGCCGGCAA GATCCTGGCC
GCGCCCATCG ATGCGCTGGA GCGCTACCGC ACGCACCGCC TCATGCCCGT GCTCACGCAG
GACGTGGACA TGATCAGCGA CGTGGCCTTC GTGCTGGCCT CCAACGTGAT CGCCCTGGCC
ATTGCGCTGG GCTGCCTGGC CTATCTGGCC CTGCTGTCGC CGCCGCTGTT TGCCATGCTG
GTGGTGGCGC TGGTGCTGGG CGTGAGCCTG CAGGCGCTGG CGCAGTCACG CGGCGTGGCG
GGGTTCTGGA AGGCGCGCGA TCACGAGGAA GTGCTGCACA AGGCCTACCG CGCCATCAGC
GAAGGCGCCA AGGAGCTGCG CATGCACCGC GCGCGCCGGG GCCGCATCTT CGACGGGCAG
ATTGGCTCCA CCGTGGATGC CATCCGCAGC ATCAACAGCC GCGCCATCAA CACCTATGTG
CTGGCCACGG CCTTCGGTTC GGCGCTGTTC TTTCTGTTGA TTGCCCTCAT CCTGGGCTGG
GCCGCGCTGC GCACCACCGA GCCCGTGGTG CTCAGCGGCT TCGTGCTGGT GCTGCTGTTC
CTCAAGGGCC CCATGGACCA GATCGCGGGC GCGCTGCCCA ATCTGGGCCG TGCCAAGGTG
GCGCTGCAGC GCATTGCCGA CCTGTCGGCG CGCTTTGCCA GCCCCGAGCC GCACCTGCAC
CTGGACAGTC CACCCGGCGA GGTCCGCCTG GACCACGGCC TGGAGCTGCG GGGCGTGCGC
TATGCCTTCG ATGCGCCCGA AGGCGGCAAG GCCTTCGAGA TCGGCCCCAT CGACCTGAAG
CTGGGCAAGG GCGAACTGGT CTTTGTGGTG GGCGACAACG GCTCGGGCAA GACCACGCTG
ATCAAGCTGC TGCTGGGCCT GTATGCGCCC CAGCAGGGCG AGATCCTGCA CGACGGCCAG
CCGGTCACGG CCCTGGCGCG CGACGACTAC CGCCAGCTGT TCACCACGGT GTTCTCGGAC
TTCTACCTGT TCGAGGACCT GGTGGCCGGC GGCGAAGAGG GCCAGGCCGC CGCGCTGCCC
GAGGCCGCGC TGCCCTACCT GCAGCGGCTG GAGATCGCCC ACAAGGTCAG CGTGCGCAAC
GGCAGCTTCA GCACCATCGA CCTGTCCACC GGCCAGCGCA AGCGCCTGGC CCTGGTCCAC
GCCTATCTGG AGGGCCGGCC CGTGCTGGTC TTCGACGAAT GGGCGGCCGA CCAGGATCCG
AGCTTCCGCC ACCTGTTCTA CACCGAGCTG CTGCCCGAAC TGCGCGCCAG GGGCCACCTG
CTGGTGGTCA TCTCCCATGA CGATCGCTAC TTCCACCTGG CCGACCGCAT CGTGCGCATG
GAGGCCGGCC GCATGGTCCT GCCGCAAGAC GGGGCGCAGC CGGTGGTGGC TGCATCGGCC
AGTCCCGCCA GTCAAGGCGC GCTGGCCGAC ATCTGA
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| Protein sequence | MENASRPPSE VLRLLKPFLP WMALSVVTGI CAGGATVALL ATINQVLNRP GGLAGGLLLT
FIALCATVLV CRATSDMSGN FVGQRLVAQL RKELAGKILA APIDALERYR THRLMPVLTQ
DVDMISDVAF VLASNVIALA IALGCLAYLA LLSPPLFAML VVALVLGVSL QALAQSRGVA
GFWKARDHEE VLHKAYRAIS EGAKELRMHR ARRGRIFDGQ IGSTVDAIRS INSRAINTYV
LATAFGSALF FLLIALILGW AALRTTEPVV LSGFVLVLLF LKGPMDQIAG ALPNLGRAKV
ALQRIADLSA RFASPEPHLH LDSPPGEVRL DHGLELRGVR YAFDAPEGGK AFEIGPIDLK
LGKGELVFVV GDNGSGKTTL IKLLLGLYAP QQGEILHDGQ PVTALARDDY RQLFTTVFSD
FYLFEDLVAG GEEGQAAALP EAALPYLQRL EIAHKVSVRN GSFSTIDLST GQRKRLALVH
AYLEGRPVLV FDEWAADQDP SFRHLFYTEL LPELRARGHL LVVISHDDRY FHLADRIVRM
EAGRMVLPQD GAQPVVAASA SPASQGALAD I
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