Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4744 |
Symbol | |
ID | 5750336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 5199741 |
End bp | 5200499 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641299849 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001565758 |
Protein GI | 160900176 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.231738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.320851 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGATCA AGGACCGGGT ATTCATCGTC ACGGGCGGCG CCTCCGGGCT GGGCGAAGGC ACGGCGCGCA TGCTGGCTGC CGAGGGCGGC AAGGTGGTGA TTGCCGACAT GCAGGCGGAC AAGGGCGAGG CGGTGGCGCG CGAGATCGGT GGCGTCTTCG TCAAATGTGA CGTGAGCCAG GAAGCCGATG GCCAGGCCGT GGTGGACAAG GCCGTGAGCC TGGGCAAGCT GGCAGGCCTG GTCAACTGCG CAGGCATTGC GCCCGCCGAG AAGACCGTGG GCAAGAACGG CGCGCACAAC CTGGGTCTGT TCTCCAAGAC CATCACCGTC AACCTGATCG GCAGCTTCAA CATGATCCGC CTGGCCGCCA CCGCCATGTC GGCCAACGAG CCCGAGAGCA CGGGCGAGCG CGGCGTGCTG ATCTCCACGG CCAGCGTGGC GGCCTACGAC GGCCAGATCG GCCAGGCGGC CTATGCGGCG TCCAAGGGCG GCGTGGTCGG CATGACGCTG CCCATTGCGC GGGATCTGGC GCGCAACGGC ATCCGCAACA TGACGATTGC TCCCGGCATC TTCGGCACGC CCATGCTGTT CGGCATGCCG CAGGAAGTGC AGGACGCGCT GGCCGCCGGC GTGCCCTTCC CCAGCCGCCT GGGCACGCCC CAGGACTATG CCAAGCTGGT GCGCCACATC CTGGACAACG ACATGCTCAA TGGCGAGGTG ATCCGGCTGG ATGGGGCCAT TCGTCTGGCG CCGAAGTAA
|
Protein sequence | MQIKDRVFIV TGGASGLGEG TARMLAAEGG KVVIADMQAD KGEAVAREIG GVFVKCDVSQ EADGQAVVDK AVSLGKLAGL VNCAGIAPAE KTVGKNGAHN LGLFSKTITV NLIGSFNMIR LAATAMSANE PESTGERGVL ISTASVAAYD GQIGQAAYAA SKGGVVGMTL PIARDLARNG IRNMTIAPGI FGTPMLFGMP QEVQDALAAG VPFPSRLGTP QDYAKLVRHI LDNDMLNGEV IRLDGAIRLA PK
|
| |