| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4742 |
|---|
| Symbol | |
|---|
| ID | 5750334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 5197713 |
|---|
| End bp | 5198261 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641299847 |
|---|
| Product | phasin family protein |
|---|
| Protein accession | YP_001565756 |
|---|
| Protein GI | 160900174 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01841] phasin family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0164964 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.333304 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTGA CCCCTGACCA AATCCTGAGC GCACAAAAGG CCAACCTGGA AACCCTGTTC
GGCCTGACGA GCAAGGCCTT CGAAGGCGTT GAAAAGCTGG TGGAACTGAA TGTGACCGCC
TCGCGCGCCG CACTGACCGA AGCTGCCCAG CACACCCAGG CTGTCCTGAG CGTCAAGGAC
GCACAGGAAC TCCTGTCGCT GCAGGCCAAC CTGTTCCAGC CCCTGGCTGA AAAGACCGCT
GCCTACAGCC GTCACCTGTA CGACATCGCC AGCGGCACCG GCGCCGAACT GGCCAAGACC
TTCGAAAGCC AGGCATCCGA CCTGCAAAAG AACTTCAGCG CCCTGGTGGA CACCACGGCC
AAGAACGCAC CCGCCGGTTC CGAAACCGCC GTTGCCGTGA TGAAGAGCGC CGTGTCGGCT
GCCAACAATG CCTTCGAGTC GGTGCAAAAG GCCGTCAAGC AGGCTTCGGA CCTGGCGGAA
GCCAACTTCA CGGCCGTGAC CAACACCGCC AGCGAAGCCG TCCAGTCGGC CCAGACCCGC
AAGCGTTGA
|
|---|
| Protein sequence | MSLTPDQILS AQKANLETLF GLTSKAFEGV EKLVELNVTA SRAALTEAAQ HTQAVLSVKD
AQELLSLQAN LFQPLAEKTA AYSRHLYDIA SGTGAELAKT FESQASDLQK NFSALVDTTA
KNAPAGSETA VAVMKSAVSA ANNAFESVQK AVKQASDLAE ANFTAVTNTA SEAVQSAQTR
KR
|
|---|
| |