| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4727 |
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| Symbol | |
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| ID | 5750319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5180842 |
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| End bp | 5182017 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641299832 |
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| Product | tetratricopeptide repeat protein |
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| Protein accession | YP_001565741 |
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| Protein GI | 160900159 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.841453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTTG ATCTGAGCTG GATATTGCTG GGCCTGCCCG TCGCCTTCGT GCTGGGCTGG
CTGGCCTCGC GCTGGGACCT GAGGCAGATT CGCGCCGAAA ACCGCCAGGC GCCCAAGGCC
TATTTCAAGG GTCTGAACTT CCTGCTCAAC GAGCAGCAGG ACAAGGCCAT CGACGCCTTC
ATCGAAGCCG TGCAGAACGA CCCCGACACT TCGGAGCTGC ACTTCGCGCT GGGCAACCTC
TTCCGCCGCC GTGGCGAATA CAACCGCGCT GTGCGCGTGC ACGAACACCT GCTGTCGCGC
GGCGACCTCA GCCGCGTGGA CCGCGACCGC GCCCAGCACG CGCTGGCCCA GGACTTTCTG
AAGGCAGGCC TGCTCGATCG CGCCGAGGAC GCGCTGCGCC GCCTGGAAGG CACGGCCTTC
GAGGCAGAAG CCCGCCTGGC CCTGCTGGCC ATCTACGAAC GCTCGCGCGA CTGGACACAG
GCCGCCGCCA TTGCGCGCCG CATGCAGGAA GCCAACCAGG GCGACTTCAG CGGCCGCCTG
GCCCACTACC TCTGCGAAGA CGCCCAGGCC CTGTTGACCC AGGGCCAGCA GGCCGAGGCA
CTGCAGCGGC TGCAGCAGGC CATCACCACC GCCCCACAGG CCGCACGCCC GCGCCTGGAG
CACGCGCAGC TGCAGCACCG CATGGGGCAA TCGGCCCAGG CCCTGCACAC GTTGGAAAGC
CTGGCCGAGC AGTCCCCGGC CTCGCTGCCG CTGGCGGCTC AGCTGCTGGT GGACATTGCC
GCCGCCACGG GCCAGCGCCA GCACATCCAC CAACTGCTCA GCCAGCAGTA CGAGCAGGCA
CCCTCGCTGG ATCTGCTGCA GGCCCTGGTC GCGCTGGACG CTCAGATTGA AGAACAGAGC
AACGATGGTG AAACCGGGGC ACCGGGACGC GCACGCCTGG TACAGCATCT GGACAGGGAG
CCCTCCCTGG TGGCTGCCGC GCAGTGGCTG GCAGGCGAGA AGCTGGCCGA GGAGCAATAC
CACCCGGCCG TGCAACGCGC GCTGGACCAC GCGGCCAAGC CGCTGACCCG CTACCGCTGC
GCAGCCTGCG GCTTCGAGGC ACGCCAGCAT TTCTGGCATT GCCCCGGCTG CCAGAGCTGG
GACAGCTATC CGGCCCGGCG CGTCGAGGAG CTGTGA
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| Protein sequence | MEFDLSWILL GLPVAFVLGW LASRWDLRQI RAENRQAPKA YFKGLNFLLN EQQDKAIDAF
IEAVQNDPDT SELHFALGNL FRRRGEYNRA VRVHEHLLSR GDLSRVDRDR AQHALAQDFL
KAGLLDRAED ALRRLEGTAF EAEARLALLA IYERSRDWTQ AAAIARRMQE ANQGDFSGRL
AHYLCEDAQA LLTQGQQAEA LQRLQQAITT APQAARPRLE HAQLQHRMGQ SAQALHTLES
LAEQSPASLP LAAQLLVDIA AATGQRQHIH QLLSQQYEQA PSLDLLQALV ALDAQIEEQS
NDGETGAPGR ARLVQHLDRE PSLVAAAQWL AGEKLAEEQY HPAVQRALDH AAKPLTRYRC
AACGFEARQH FWHCPGCQSW DSYPARRVEE L
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