| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4713 |
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| Symbol | |
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| ID | 5750304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5162323 |
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| End bp | 5166177 |
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| Gene Length | 3855 bp |
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| Protein Length | 1284 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641299817 |
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| Product | endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_001565727 |
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| Protein GI | 160900145 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.814549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGGGA GCGCATTGTT TTTTTATTGC GCATCCATGT CCATTGCTGC CACGCTGATT
CCATTTGTTT TCAACCCGGC CAATTCGATG AGTGCGCCAT TGCAGCGGCA TCGTTGGCGT
CTGTATGGTG CGGGCCTGCT TCTTTCGGCG TCTGCCGGGG TATGGGCGCA GGTTCCCTTC
AACGGCACCT ACACGCAGAA TTTCGACACC CTGGCCGCGT CCGGGGCGGG GCTGGCCTGG
GCCAATAACA GCACCTTGCC GGGCTGGTTT CTCTTCAACA AGAACTTGGC ATCCATCACC
TCTTATGTGG CTGGCAATGG TGCCTCCAAC ACCGGCAGCT TCTACAGCCT GGGGCTGAGC
ACGGACCGTG CCTTGGGGGG AGTGGCATCA GGCGGTGCCT ACTTTGGCAG CCCGGCCCAG
GGCGCTGTAG CGGGTTGGAT TGCGCTGGCG GTGCGCAATG ACACGGGCGG CTCGGTCGAT
GGCATCACCT TGCGATTCAA CGGCGAGCAA TGGCGCAACG GTGGCAATAC GGAACCGCAG
CCCATGGTGC TGGAGTACGG CATGGGAGCC ACCTTTTCCG ATGTGCCTGA ATGGCTGCCT
GCCGGCGCGA ACTTCAATTG GCAATCGCCT GTTGCCACCG GAACTGCTGC CGCCGTGGAC
GGCAATGTGG CCGGGCGGGT GAACAATGTG GGCGGGGATC TGCGCGGCCT GGGCTGGGCG
CCAGGTGCCA CGCTGTGGCT GCGTTGGGTG GAACTCAATG ATGTGGGCAA CGACCACGGC
CTGGCCATTG ATGACGTCTC CATCACCCTG GCGCTGCCCG ACACCACGGC GCCCACGCTG
CAGGCAAGCA TTCCCGCGGA GGCGGCAACC GGGGTGGCGC TGAATCCCGA AATCAAGCTG
AGTTTCGATG AGGCGGTGAA GCCCGGTAGC GGCAGCTTCG AACTGCGCCA GGGCGCCACG
GTGGTGGCAA CGCTGCAGGC TGGCGATGCG GCGCAGGTGA AATTCAGTGG CTCGACCATC
ACGCTCAACG CGGGTGTGCG GCTGGCTGTC AATACGCCCT ACAGCCTGGT TTCCGTGGGC
GAGCCGGTGT TGGATACCTC GGGCAATGTG TGGACCGGCA CGACGCTGGG CTTCACGACA
GGAGACGAGC CGCCGGTCAC CAGGATTTCT GCGGTCCAGG GCTCTGGCGA TCAGTCTCCG
CTGGTGGGGC AGAAGGTGAC GGTGAGTGCC GTGGTGACGG CCTATATGCC TGGACTGAGC
GGTTTCTTCA TGCAGGAAGA GGCGGCAGAC TCCGATGGGG ACGCTGCTAC CTCGGAGGGC
ATCTTTGTCT ACTACGGCAA CGCCAATCCT GGCGTGGATG AGAGCACGGT GGGCAAGCTG
GTGCAGATTT CCGCCTCGGT GAGCGAGTTC CGCAATCAGA CCCAGCTCAG CGCCATCACG
GACTTCGTGG TCCGCGGCGC GGCGGCCTTG CCGGAGCCAG TGCGCATCGC ACTGCCTGTC
AGCGACATGG GGCAATGGGA GCGTCTGGAA GGCATGCGTG TGGAGGTGGC ATCCGCCACC
GCAGGCGGCA AGCTGGTGGT GAGCGACAAC CGCACGCTGG GCCGCTACGG CAATGTCACG
CTGTCTGCCG ATACGCCGTT GGCGCAGTAC ACCGAAGTCA ACGCTCCCAG CGTGGCGGGC
TATGCAGCCT ACGTGCAGAC GCTGCAGCGC AGCCAGATCA TTCTCGATGA TCGCTCCGGG
GCCCAGAATC CCGAGTTCGT GCCGGGTCGT GGCGGCTTGC CGCTGTCGGC GTCCAACACG
CTGCGGGCTG GCGATGGCGT GGATCGCGTC ATCGGCGTGC TCGACCAGTT TTTTGATGCT
GCCGCCAGCG AGCCCTATCT GACCAGCTAC CGCGTGCAGC CCACGCAGAC GCCGCAGTTC
ACGGGAGCCG CGCGCCCTTC TGCTGCTGAA TTGCAGCAGG CCGTGGGAGC GGCCACGCTC
AAGATCGCGT CTGCCAACGT TCTCAATTTC TTCAACCTGA CCGGTGCCAC AAGCGGCTCT
TCTCAGGTGA TGTTCAACAC GCCGCTGGGC AACCAGCAGG GCATTCGCGG TGCCAACAGC
ATTGCCGAGC TGGACAGGCA GCGCGCCAAG ATCGTGGCCA ATCTGCTGGG GCTGGGCGCC
GATGTGTATG GCCTGATGGA GGTGCAGAAC AATGGCTTTG GTCCGGGCAG CGCCATCCAG
GATCTGGCCG ACGCCCTGAA CGCGAGTGCC GACAAGCCTG CCGGCGCCGT GTATGCGGTG
GTCAAGGCAC CCTTCACTGA GGCTGCAGGC ACGGTGCCAG GCGCGGGCAC GGATGCCATT
ACCGTGGCCA TCGTCTATCG CAGCGACCGC GTCACGCCGG TGGGCAGCGC AGCGGCACCC
AATGTCTCTA CCTACGATGC CTTCAACGCA AGCATCGGCG GAGCCCGGGT GCCGATTGCG
CAGACCTTTG CCGTGGGCGG CAGCACGGAG CAGTTCACCC TGGTGGTGAA CCATTTCAAA
TCCAAGGGCA GCGTGCTCGG TGGCGCGGGC AATGCGGACG TGCTCGACGG CCAGGGCGCC
AACAACGCGG CGCGCGTGAA GACGGCCCAG CAACTGAGCA ACTGGCTGGC AACCCGGCCC
ACAGGCGTAA CCAGCCCCCA CGTGGTGCTG GTGGGCGATT TCAACGCCTA TGCGAAGGAA
GACCCCATCA CCACGCTGGA GTCCGGCGGC TATGTCAAGG TCTCCCAGGG GCTGTCCTAT
GCATTCGACG GAATGTGGGG TTCGCTGGAC CATGTGCTGG TGAGCACCAG CCTGCAGCCC
AGCGTGGGGC GTGAGGTCAA GTGGGCCATC AATGCCGAGG AGCCCGAGGT GCTCGACTAC
AACGTCGAGT TCAAGTCGCT GGATCAGCAG GCCAGCTTCT ATGCGCCCAC CGCCTATCGT
TCCAGTGATC ACAACCCCAT TCTCCTGGGG CTGAATTTCG GTGGCCAGGC GCCATCGTTC
AGTGGCGTGC CTGCCAATGC GCAGGCGGTG GTGGTGGGGC AGGCGGCCGA TCTGGCGGAC
GTGGTGGTGG CCGATGCCGA CAGCCCCGTC GTCACACTGT CCATCGTCGC CAGCGGCGGA
CAGGTGCTGG GCCTGGAGGA TGCTGATGCT GTACAGCCCG GCATACAACT GCGCGGCAGC
CCCGAACAGG TATCGCAGCA ATTGCGCGCC GCCATGTACA TGGCTTCGGT AGCCGGCCCG
GCCAGCCTGC AACTGAGCGT GAGTGATGGT GTCCATGCGG CTGTGACGGC CAGCTATCCG
CTGCTGGCGA CCGCAGCGGG CGCAGTGGAC CCGGCCAATC GATTCAACAT CACCGGAGCA
AGCCAGATTG CGGTTGCGGG CGAGGTCGTG GGCGGTGGCG CCAACTGCCG CTTGGCCGAG
CCGCCGCAGG TCATGGCGGC ACCGGGTACT CCGCGTTCTG GGGCGGTGGT GCCACACGGG
CTGTTGAAGC TCAACACCGA TGGCTGTGAT GCGGGTGCGC TCGTGACGGT CAGGCTGACC
TATCCGAACG ATTTGCCCAG TGGTGCTGAA TACTGGAAGT GGGGCCGCAC GGCAGATAAC
ACCACGCAGC ACTGGTACCG CATACCTGCA ACGCTGCAGG GTCGCGTCGT CTCCTTCGTG
CTGCGCGATG GCGGCCTGGG CGATGACGAT CTTCTGGCCA ATGGCCGTGT GGAAGACCCT
TCGGCCCTGG TGCTGCCTGC CGCGGTCGGT GGCGGTACGC CGGCGGCGAT TCCGTCACTG
AGCGAGTGGG CGGTCGCGCT GCTGAGCCTG ATGATGGGTG GACTGGCCAT CCGCCTGCGC
CGCCGCAAAC CTTGA
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| Protein sequence | MGGSALFFYC ASMSIAATLI PFVFNPANSM SAPLQRHRWR LYGAGLLLSA SAGVWAQVPF
NGTYTQNFDT LAASGAGLAW ANNSTLPGWF LFNKNLASIT SYVAGNGASN TGSFYSLGLS
TDRALGGVAS GGAYFGSPAQ GAVAGWIALA VRNDTGGSVD GITLRFNGEQ WRNGGNTEPQ
PMVLEYGMGA TFSDVPEWLP AGANFNWQSP VATGTAAAVD GNVAGRVNNV GGDLRGLGWA
PGATLWLRWV ELNDVGNDHG LAIDDVSITL ALPDTTAPTL QASIPAEAAT GVALNPEIKL
SFDEAVKPGS GSFELRQGAT VVATLQAGDA AQVKFSGSTI TLNAGVRLAV NTPYSLVSVG
EPVLDTSGNV WTGTTLGFTT GDEPPVTRIS AVQGSGDQSP LVGQKVTVSA VVTAYMPGLS
GFFMQEEAAD SDGDAATSEG IFVYYGNANP GVDESTVGKL VQISASVSEF RNQTQLSAIT
DFVVRGAAAL PEPVRIALPV SDMGQWERLE GMRVEVASAT AGGKLVVSDN RTLGRYGNVT
LSADTPLAQY TEVNAPSVAG YAAYVQTLQR SQIILDDRSG AQNPEFVPGR GGLPLSASNT
LRAGDGVDRV IGVLDQFFDA AASEPYLTSY RVQPTQTPQF TGAARPSAAE LQQAVGAATL
KIASANVLNF FNLTGATSGS SQVMFNTPLG NQQGIRGANS IAELDRQRAK IVANLLGLGA
DVYGLMEVQN NGFGPGSAIQ DLADALNASA DKPAGAVYAV VKAPFTEAAG TVPGAGTDAI
TVAIVYRSDR VTPVGSAAAP NVSTYDAFNA SIGGARVPIA QTFAVGGSTE QFTLVVNHFK
SKGSVLGGAG NADVLDGQGA NNAARVKTAQ QLSNWLATRP TGVTSPHVVL VGDFNAYAKE
DPITTLESGG YVKVSQGLSY AFDGMWGSLD HVLVSTSLQP SVGREVKWAI NAEEPEVLDY
NVEFKSLDQQ ASFYAPTAYR SSDHNPILLG LNFGGQAPSF SGVPANAQAV VVGQAADLAD
VVVADADSPV VTLSIVASGG QVLGLEDADA VQPGIQLRGS PEQVSQQLRA AMYMASVAGP
ASLQLSVSDG VHAAVTASYP LLATAAGAVD PANRFNITGA SQIAVAGEVV GGGANCRLAE
PPQVMAAPGT PRSGAVVPHG LLKLNTDGCD AGALVTVRLT YPNDLPSGAE YWKWGRTADN
TTQHWYRIPA TLQGRVVSFV LRDGGLGDDD LLANGRVEDP SALVLPAAVG GGTPAAIPSL
SEWAVALLSL MMGGLAIRLR RRKP
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