| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4712 |
|---|
| Symbol | |
|---|
| ID | 5750303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 5161015 |
|---|
| End bp | 5161341 |
|---|
| Gene Length | 327 bp |
|---|
| Protein Length | 108 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641299816 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001565726 |
|---|
| Protein GI | 160900144 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.658591 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAAA TGACGCAAAG GCTTGAGGGC CTGCTCGCAT CCGGCAAGGA CTCGGCCCTG
CTGCGCTGTA CCTTGGGCAA GACCTATCTT GAAAACGAGG CGCCTGAGGT GGCTCATTCA
CACCTGGAGC GGGCCACTGA ACTCGATCCC GGCTATTCGG TGGCGTGGAA GCTGCTGGGC
CGGGCATTGC TGGCGCTGGG CGACGCTGCT GGAGCGCGGC GGGCGTGGAA TACGGGATTG
GCCTGCGCGC AGCAGAAGGG GGATGCCCAG GTCGTAAAGG AGATTGGTGT GTTCCTCAAG
CGCCTGGACA GGCAGCAGGC GGGCTGA
|
|---|
| Protein sequence | MNEMTQRLEG LLASGKDSAL LRCTLGKTYL ENEAPEVAHS HLERATELDP GYSVAWKLLG
RALLALGDAA GARRAWNTGL ACAQQKGDAQ VVKEIGVFLK RLDRQQAG
|
|---|
| |