Gene Daci_4711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4711 
Symbol 
ID5750302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5160491 
End bp5160955 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content67% 
IMG OID641299815 
Productribonuclease H 
Protein accessionYP_001565725 
Protein GI160900143 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.42605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCTGG AAAAGCCCCC ATCACGCCCA AGCGCCTGCG GCCCCGCGCC CTCAGACGCC 
GACCTCTGGA CTGCCTACAT CGATGCAAGC GCCGTACCGA ACCCCGGACG CATGGCCATG
GGCGCCGTCA TCACCGCACC CGACGGACGC CGCCACCTTC TGTCCGAGCC CTGCCACGAG
CGAGGCTGCA ATAACGAAGC CGAACTGCGC GCCCTGATGG CCGCGCTGCA GGCCCTGCAA
GGCCTGCAGG CGCGCCGCCT GACCATCTTC ACGGACAGCA GCATCCTGGT GGAGCAGCTG
ACTCCATCGC TACGCCCCAT CAAGCCCATC GCGCGTCTGG CAGACCTCTT TGATGAGGCC
CGCACCATGC TGACCGGGTT CGAGCACGTG CAACTGCGCT GGATACCCCG CCACCGCAAC
ACCGAGGCCG ACGCCCTGGC CAGGGAAGCT CTTTTGCAGG CGTGA
 
Protein sequence
MPLEKPPSRP SACGPAPSDA DLWTAYIDAS AVPNPGRMAM GAVITAPDGR RHLLSEPCHE 
RGCNNEAELR ALMAALQALQ GLQARRLTIF TDSSILVEQL TPSLRPIKPI ARLADLFDEA
RTMLTGFEHV QLRWIPRHRN TEADALAREA LLQA