Gene Daci_4709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4709 
Symbol 
ID5750300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5159260 
End bp5159694 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content65% 
IMG OID641299813 
Productputative lipoprotein 
Protein accessionYP_001565723 
Protein GI160900141 
COG category[S] Function unknown 
COG ID[COG3126] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.100593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCCA ACAGCCTTCA GCGCCGCACA GCCCTGGCCC TCGTGATGTC CGCAGCACTG 
CTGGGTGCAT GCGCCCAGAC CCAGCCTGCG CCCAATGCGC CCGTCACTGC GGTCATGGGA
ACGGTTGACC TGAGGGAGCC CGCTCCGCTT GCGCCCGACG CCGTGCTGGT CGTCGAATTG
CAGGACACCT CGCGCGCCGA TGCTCCCGCC CCGGTGATAT CCCAGCAGTC CATGCGGCTC
GAAGGCCTCA AGCCGCCCTA CAGCTTCAAG CTGCCCGTCG AGCCCAGCCG CCTGAATCCT
GCCGCGCAAT ACACGGTCAC CTCACGCATT ACCCAGGGCA ATCAACTCAT CTTCATCAAT
GACACCGTCC ACCCGGTGCT GACCCGTGGT GCAGGCTCGA AGGCCGACAT GATGCTGGTG
CGCGTCGCCC CCTGA
 
Protein sequence
MNSNSLQRRT ALALVMSAAL LGACAQTQPA PNAPVTAVMG TVDLREPAPL APDAVLVVEL 
QDTSRADAPA PVISQQSMRL EGLKPPYSFK LPVEPSRLNP AAQYTVTSRI TQGNQLIFIN
DTVHPVLTRG AGSKADMMLV RVAP