Gene Daci_4704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4704 
Symbol 
ID5750295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5154929 
End bp5155789 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content66% 
IMG OID641299808 
ProductD12 class N6 adenine-specific DNA methyltransferase 
Protein accessionYP_001565718 
Protein GI160900136 
COG category[L] Replication, recombination and repair 
COG ID[COG0338] Site-specific DNA methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0118751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACAAG TCACATCCCC CGCATTGCGC TATCACGGCG CCAAGTTCCG GCTGGCGCCC 
TGGGTGCTTC AACACTTCCC CACGCACCGC TGCTACGTCG AGCCATTCGG CGGCGCGGCT
GGCGTGCTGT TGCAAAAGCC GCGGGCATAT GCCGAGGTCT ACAATGACCT GGACGACGAC
ATCGCCAATT TCTTCCGCGT GTTGCGGGAC CCTGGCCAGT CCGAACGACT CATCCAGCTG
CTGCACCTCA CGCCATACGC GCGGGCCGAG TTCGACCTGT CATATCAGGA CTGCGAAGAG
CCGGTAGAGC GGGCGCGGCG CACCGCCGTG CGAGCGTGCA TGGGCTTCGG CTCTGCAGGT
GCCACCAAGG GCGTGACGGG CTTTCGCATT GACACTGCCA GGCCCTACGG CACGGCCCAG
CACCTCTGGA GCCGCTACCC AGGCCAGCTG CCACCCATCA TCGAGCGCCT GCAGGGCGTG
CTGATCGAGA ACCGGCCCGC GGTCGAGGTC ATGCAGCAGC ACGACACCGC CGACACGCTG
CACTTCGTGG ATCCGCCCTA CGTGTTCGGC ACGCGCTCGC TGCGCAACGT CACGCAGGGC
TGCTACCGCC ACGAGATGAC GGACGAGCAG CACATCGAGC TGCTGGGCGT GCTGCGTGGC
CTCAGAGGCA TGGTCGTGCT CAGCGGCTAC CCATCGGAAC TGTACGAGCG CGAGCTGGCC
GACTGGCAGG TCCACACCAC CGGCGCCCGT ATCTCGGCCG GGCGCGGCAC CGCCGTGAAA
ACAGAGGTGC TTTGGCTCAA CCCAGCTTGT CAGCAGCACC TGGCCGCGCC ACCTGCCGTC
CAGCAAGCGC TCGGAATCTA G
 
Protein sequence
MPQVTSPALR YHGAKFRLAP WVLQHFPTHR CYVEPFGGAA GVLLQKPRAY AEVYNDLDDD 
IANFFRVLRD PGQSERLIQL LHLTPYARAE FDLSYQDCEE PVERARRTAV RACMGFGSAG
ATKGVTGFRI DTARPYGTAQ HLWSRYPGQL PPIIERLQGV LIENRPAVEV MQQHDTADTL
HFVDPPYVFG TRSLRNVTQG CYRHEMTDEQ HIELLGVLRG LRGMVVLSGY PSELYERELA
DWQVHTTGAR ISAGRGTAVK TEVLWLNPAC QQHLAAPPAV QQALGI