| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4660 |
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| Symbol | psd |
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| ID | 5750250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5117139 |
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| End bp | 5117993 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641299763 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_001565674 |
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| Protein GI | 160900092 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0641109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00820033 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTGATC GACTTGCCGT TCTCTCCCAG TATCTTTTGC CCAAGCAGGC GCTGACTGCC
GTCATGGGGC GCCTGGCCCA GGCGCGTGCT GGCGACCTGA CCACGGCAGT CATCCGGCGC
TTCATTGCAC GCTATGGCGT GGACATGTCG GAGGCGGCCG ATTCCGATCC TGCGGCCTAT
GCCAGCTTCA ACGAGTTCTT CACGCGGGCG CTCAAGCCCG GTGTGCGGCC GCTGGCTTCG
GCCGACTGGG TCTGTCCGGT GGATGGGGCC ATCAGCCAGA TCGGCGCCAT CGAGGGCGAG
CAGATCTTCC AGGCCAAGGG ACACAGCTAC AGCGCCACGG CGCTGGTCGG AGGCGATGCG
CAGTTGGCGC GGCAGTTCGA CAACGGGCAT TTCGCCACCA TTTACCTGAG CCCGCGCGAC
TACCACCGCA TCCACATGCC CTGTGCCGGC CGGCTGCGGC GCATGATCTA TGTGCCGGGC
GAACTGTTCT CGGTCAACCC GGTCACGGCG CGCGGCGTGC CGGGCCTGTT TGCGCGCAAC
GAGCGCGTGG TCTGCGTTTT CGATACCGAC CACGGTCCCA TGGTGCTGGT GCTGGTGGGC
GCCACCATCG TGGGCAGCAT GGGAACGGTG TGGCACGGCA TCGTCAATCC GCCCCGTCCC
GGACGCATCC AGGACTGGCG CTATGACGAC CAGTCCATCG TCCTGGGCCA GGGCGAGGAA
ATGGGGCGCT TCCAGCTGGG CTCCACCGTC GTCATGCTGT TTCCCGCATC GGCAGGGCTT
CGCTTCAACG GGCAGTGGAC GCATGCTGCG CCCGTGCGCC TGGGCCAGAA GATGGCAGGG
CGCAACGAGG CCTGA
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| Protein sequence | MSDRLAVLSQ YLLPKQALTA VMGRLAQARA GDLTTAVIRR FIARYGVDMS EAADSDPAAY
ASFNEFFTRA LKPGVRPLAS ADWVCPVDGA ISQIGAIEGE QIFQAKGHSY SATALVGGDA
QLARQFDNGH FATIYLSPRD YHRIHMPCAG RLRRMIYVPG ELFSVNPVTA RGVPGLFARN
ERVVCVFDTD HGPMVLVLVG ATIVGSMGTV WHGIVNPPRP GRIQDWRYDD QSIVLGQGEE
MGRFQLGSTV VMLFPASAGL RFNGQWTHAA PVRLGQKMAG RNEA
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