Gene Daci_4653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4653 
Symbol 
ID5750243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5111665 
End bp5112048 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content67% 
IMG OID641299756 
Producthypothetical protein 
Protein accessionYP_001565667 
Protein GI160900085 
COG category[S] Function unknown 
COG ID[COG3749] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.768323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00156342 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATCA TCGCCGCCCA AGAGCACCAA AGCCCGGCCG AAGGCCAGCA GACCATCATC 
GCCCCGGCCA ATGACGCCGA TCCCTTCACG CTGGATCTGA CCGGCGTGCA GCGCATCGAC
CTCAACTTTC CCAAGTTCAC CGATGGCCGC GCCTTCAGCC AGGCCCGCCT GCTGCGCAAG
CGCCTGGGCT TCCAGGGCGA AATCCGCGCC ACCGGCGACG TGCTGATCGA CCAGCTGGTG
CAGATGCAGC GCTGCGGCTT CGACGTGGCC GTGCTGCGCG AAGGCGTGGA CATCGCCGAC
GCCCAGCGCC AGCTGGACCG CTTCCACGGC TTCTACCAGG GTGATGCCGT CCATCCCGAG
CCCCACTTCG TCAAGGCGGC CTGA
 
Protein sequence
MKIIAAQEHQ SPAEGQQTII APANDADPFT LDLTGVQRID LNFPKFTDGR AFSQARLLRK 
RLGFQGEIRA TGDVLIDQLV QMQRCGFDVA VLREGVDIAD AQRQLDRFHG FYQGDAVHPE
PHFVKAA