| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4645 |
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| Symbol | |
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| ID | 5750235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 5102073 |
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| End bp | 5104154 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641299748 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001565659 |
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| Protein GI | 160900077 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0000318415 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACCCGCC AGCCCCGCTC CTGCGCTCCC GCATCCTCAC CCGCCCTCTG CTCACCCTCG
TTCCGCCTTC GCTCCACGCT GACACACGCC CTGCTGCTCG CAGGCCTGGC CGCCAGCACG
CAGGCGCAAG CCCAGGTCGA GGCCCCATCG GGTACGCCTG CAGCACCGGC TTCGCAGACC
TTCCAGTTGG GCACGGTCGA TGTGCACGGT GCGCGTGATG AAGCACAGGC CATATCCGGC
GATGAACAGC GACTGGACGC CGCCGAGATG CGCCAGCGCA ATGCCGACAC CGTGGCCGAC
GCCGTGCGCC TGCTGCCGGG CGCCACGCTG TCGCGCAACA ATCGCAACGA GGAAATGATC
TATCTGCGCG GCTTCGATCC GCGCCAGGTG CCGGTCTTCG TGGACGGCGT GCCGTTGTAC
GTGCCCTATG ACGGCTATGT GGACTTCGGC CGCTTCACCA CGTTCGACCT GTCCGAGATC
CGCGTGGCCA AGGCCGGCGC ATCGCTGATG TATGGCCCCA ATACGCTGGG CGGCGCCATC
AACCTGGTCA CGCGCAAGCC CGTCAAAGCG TTCGAGGGCG ATGCACGCAT CGGCGCAGGC
GCAGGCGGCG AACGCAAGGC CGCCGTGAAC CTGGGCGGCA ACCTGGGCAC CTGGTACTAC
CAGCTTGGCG CCTCCTACCT GGACGCGGAC AGTTTTCCGC TGCCCAAGGG CTTCAAGGAC
TTCAAGAAGC AGCCCACCGA CACGGGCAAC TACCGCGACA ACGCCTACCG CACGGACAAG
CGGCTGTCGT TCAAGCTGGG CCTGACGCCC AATGCCACGG ACGAATACGC GCTGGGCTAT
GTGCGCCAGG AAGGCGAGAA GGGCAACCCC GTGTATAGCG GCAGCGCCAC GGGCAAGAAC
GTCATCCGCT ACTGGCGCTG GCCCTATTGG GACAAGGACA GCGTGTACTT TCTGAGCACC
ACGCGCATCA ATGCCGACAA CCTGCTCAAG ACGCGTATCT ACCACGACAC CTACCAAAAT
GGCCTGGACA TGTACACGGA CGCGAGCTAC TCGCGCCATG ACCCCACCAG CAGCTACAAG
GACGTGAGCC AGGGCGCCAG CATCGAGTGG GCCAACTACA GCTTCAAGGG CCATGCGCTG
CGCCTGGGCG CGCACTACAA GATCGACGAG CACACCGATG CCGCCTCGGC CAAGGACCCC
AGCAAGCACT ACCGCGACGT GACGCGCTCG CTGGTGGTCG AGGACACGAT CTCCCTGGCC
GAACGCTGGA GCCTGAACCT GGCGCTCAGC CACGACCAGC GCGATGCGCG CGAGGTCTAC
CAGTGGCCCA CGGGCTCCGC CAGCGCCACC AATGGCGTGG CCAAGCTCGG CTATGCGCTG
GGCGGTGGCA GCGAGGCGTA TTTCATCGCC TCGCACAAGA CGCGCTTTCC CACCATCAAG
GACCGCTACT CGGCACGCAT GGGCACGGCC CTGGCCAACC CCGACCTGCA GCCCGAGACC
GCCAACCACC TGGAGCTGGG CGTCAGCGGC TCGCCCTGGC AGGGCGGCCA GGGCCAGGCC
GCGCTGTTCT ACAGCCGCGT GCGCAACCAG ATCCAGACCG TGGTCGTGGC CTCGGCCGAA
TGCGGCGGCA CCACCTGCAA CCAGGCGCAG AACGTGGGGC GCACGCGCAA CATCGGCATG
GAGCTGTCCC TGGCCCAGCA ACTGTCCGCG CAATGGGGCG TGAACGCCGG CTACACCTAC
CTGAACCGCC GCAACACCAG CGACTCCAGC ATCACGCTGA CCAACACGCC GCGCCACCGC
CTGCTGGCCG GTGTCCAGTG GCGTCCGCTG GCACAGTGGG AATTCAATGC CGAGGTCGAG
ACCGAGAAGG GCCGCTACGT GCCGCTGTCG GGCAGCGGCC AGCTGCAGAC GCTCAAACTG
CCCGGCTACG GCATTGCCAA CCTGCGCGCA CGCTACAAGC CGCGCAGCGA CATCACCGTG
GACTTTGGCG TGGCCAATAT CGGCGACAAG TGGTACCAGT TCGATGACGG CCTGCCCATG
CCGGGCCGCA GCTGGTATGT CAACCTGGGC TATCGCTTCT GA
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| Protein sequence | MTRQPRSCAP ASSPALCSPS FRLRSTLTHA LLLAGLAAST QAQAQVEAPS GTPAAPASQT
FQLGTVDVHG ARDEAQAISG DEQRLDAAEM RQRNADTVAD AVRLLPGATL SRNNRNEEMI
YLRGFDPRQV PVFVDGVPLY VPYDGYVDFG RFTTFDLSEI RVAKAGASLM YGPNTLGGAI
NLVTRKPVKA FEGDARIGAG AGGERKAAVN LGGNLGTWYY QLGASYLDAD SFPLPKGFKD
FKKQPTDTGN YRDNAYRTDK RLSFKLGLTP NATDEYALGY VRQEGEKGNP VYSGSATGKN
VIRYWRWPYW DKDSVYFLST TRINADNLLK TRIYHDTYQN GLDMYTDASY SRHDPTSSYK
DVSQGASIEW ANYSFKGHAL RLGAHYKIDE HTDAASAKDP SKHYRDVTRS LVVEDTISLA
ERWSLNLALS HDQRDAREVY QWPTGSASAT NGVAKLGYAL GGGSEAYFIA SHKTRFPTIK
DRYSARMGTA LANPDLQPET ANHLELGVSG SPWQGGQGQA ALFYSRVRNQ IQTVVVASAE
CGGTTCNQAQ NVGRTRNIGM ELSLAQQLSA QWGVNAGYTY LNRRNTSDSS ITLTNTPRHR
LLAGVQWRPL AQWEFNAEVE TEKGRYVPLS GSGQLQTLKL PGYGIANLRA RYKPRSDITV
DFGVANIGDK WYQFDDGLPM PGRSWYVNLG YRF
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