| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4639 |
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| Symbol | |
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| ID | 5750229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5095156 |
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| End bp | 5096211 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641299742 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001565653 |
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| Protein GI | 160900071 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00000215932 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGCCA ATTCCAAGAA GCCCCGCCTG GACCGCGTGC GCCGCCAGGC CCTGCAACTG
CTGGGCACCA CCGCCTTCAG CTGGAGCCTG GCCGGCCAGT ACGCACGCGC CGAGACGCCG
GCCGCCGTGG CCGGGCCCGA GCAGTTGCGC ATCGGCTATC AGAAGTCGGC CGTCAACCTG
GTCATCCTCA AGCAGCAGGG CGTGCTGGAA AAGCGCTTTG CGGGCACCAA GGTCAGCTGG
CTGGAGTTCC CGGCCGGCCC CCAGCTGCTG GAGGCCCTGG CCGCAGGCAG CCTGGATTTC
GGCCTGACCG GCGATTCGCC CCCGGTCTTT GCCCAGGCCG CGGGCCGCGA CCTGCTGTAC
GTGGGCGCCG AGCCGCCCAA GCCCGAGAGC TCGGCCATCC TCGTGCCATC GGACTCGCCG
CTGCGCACCC TGGCCGATCT CAAGGGCCGG CGCGTGGCGC TGCAAAAAGG CTCCAGCGCC
CATTACCTGC TGGTGCGCGC GCTGGACAAG GCGGGCCTGG CCTGGAACGA GATCCAGCCC
GTGTACCTGG CCCCGGCCGA TGCGCGCGCC GCCTTCGAAC GCAAGAGCGT GGACGCCTGG
GCCATCTGGG ACCCGTTCTA CGCGGCCACC GAGCTGGCGA TTCGCCCGCG CGTGCTGGCC
AATGGCGAAG GCCTGTCGGG CAACGCCTCG TTCTACCTGG CCGCGCGCGG ACTGGTGGAG
CGCCATCCGC AGGTGCTGCG CGCGCTGTTC GACGAGCTCA CGCGCGCCGA TCGCCTGGCC
CAGAGCGCGC GCCAGGAGGC CGTGGCCCTG GTGGCCGGCT TCAGCGGCCT GGATGCGGCG
GTGGTCAGCC GCTTCATTGC GCGCCGGCCC AGCTCCCCCG TGGGCCTGCT GGCTGCGCAG
ACCGTGGTGG ACCAGCAGCG CGTGGCCGAT GCATTTTTTC GGCTGGGCCT GATTCCGCGC
CAGGTGCAGG TGGCCGACAT CGTCTGGCGG CCCTCGGCGG CCGAGTACGC GCGGCTGGCC
GAGCCTGCGG CGGCACGGCC TTCTTCCGCC CTTTGA
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| Protein sequence | MNANSKKPRL DRVRRQALQL LGTTAFSWSL AGQYARAETP AAVAGPEQLR IGYQKSAVNL
VILKQQGVLE KRFAGTKVSW LEFPAGPQLL EALAAGSLDF GLTGDSPPVF AQAAGRDLLY
VGAEPPKPES SAILVPSDSP LRTLADLKGR RVALQKGSSA HYLLVRALDK AGLAWNEIQP
VYLAPADARA AFERKSVDAW AIWDPFYAAT ELAIRPRVLA NGEGLSGNAS FYLAARGLVE
RHPQVLRALF DELTRADRLA QSARQEAVAL VAGFSGLDAA VVSRFIARRP SSPVGLLAAQ
TVVDQQRVAD AFFRLGLIPR QVQVADIVWR PSAAEYARLA EPAAARPSSA L
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