Gene Daci_4627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4627 
Symbol 
ID5750217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5086121 
End bp5086813 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content63% 
IMG OID641299730 
Producthypothetical protein 
Protein accessionYP_001565641 
Protein GI160900059 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000000408248 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATGATC AAGTCACCAC ACTGGGCTCT GCGGGCTACG GTGTCTCGCA GCAAGAGCGC 
AATCGCGTAT TGCGCAACAC CTACTGGCTG CTGGCCCTGA GTCTTCTCCC CACCGTGCTG
GGCGCTTGGC TGGGCGTGGC CACGGGCATC ACGCGCTCGC TGAGCGGCGG GTTGGGGCTC
ATCGTCTTCC TGGGCGGCGC CTTCGGCTTC ATGTTCGCCA TCGAGAAGAC AAAGCACTCG
GCAGCCGGCA TTCCCGTGCT CCTGGGCTTC ACGTTCTTCA TGGGCCTGAT GCTGTCGCGC
ATGATCGGCA TGATCCTGGG CTTCAAGAAC GGCTCCGAGC TGATCATGAC CGCCTTCGCA
GGCACGGCCG GCGTGTTCCT GGTCATGGCC TCGCTGGCCA CGGTGATCAA GCGCGACCTG
TCGGGCATGG GCAAGTTCCT GTTCGTCGGC GTGCTGGTAC TGTTCGTGGG CTCCATCATC
AACGTCTTCA TCGGCTCCAC GGCCGGCATG ATGGCGATCT CGGTGGCGGC CATCGGCATC
TTCAGCGCCT ACATGCTCTA TGACCTCAAG CAGATCATGG ACGGCGGCGA GACCAACTAC
ATCAGCGCCA CGCTGGCTCT GTACCTGGAC CTGTTCAACG TGTTCCAGAG CCTGCTGGCC
CTGCTGGGCA TCATGGGCGG CGAACGCGAC TGA
 
Protein sequence
MNDQVTTLGS AGYGVSQQER NRVLRNTYWL LALSLLPTVL GAWLGVATGI TRSLSGGLGL 
IVFLGGAFGF MFAIEKTKHS AAGIPVLLGF TFFMGLMLSR MIGMILGFKN GSELIMTAFA
GTAGVFLVMA SLATVIKRDL SGMGKFLFVG VLVLFVGSII NVFIGSTAGM MAISVAAIGI
FSAYMLYDLK QIMDGGETNY ISATLALYLD LFNVFQSLLA LLGIMGGERD