Gene Daci_4619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4619 
Symbol 
ID5750209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5080959 
End bp5081258 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content61% 
IMG OID641299722 
ProductSWIB/MDM2 domain-containing protein 
Protein accessionYP_001565633 
Protein GI160900051 
COG category[B] Chromatin structure and dynamics 
COG ID[COG5531] SWIB-domain-containing proteins implicated in chromatin remodeling 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.392701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.000924002 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAACTG CAAAGAAGGC AACGGCTGCT CCGGCAGCTC CCGCAAAGAA GCGCACTCCC 
AACGCCGCCT TCATGAAACC CCTCACCCCC AGCCCCGCTC TGGCTGCCGT GGTGGGTTCC
ACCCCCCTGC CCCGCACCGA GATCATCAGC AAGCTGTGGG TCTACATCAA GGCCAACAAG
CTGCAAGACG CTGCCAACAA GCGCATGATC AACGCCGACG CGAAGCTCAA GGAAGTGTTC
GGCAAGCCCC AAGTCTCGAT GTTCGAGATG GCTGGCCTGA TCGGCAAGCA CGTCAAGTAA
 
Protein sequence
MATAKKATAA PAAPAKKRTP NAAFMKPLTP SPALAAVVGS TPLPRTEIIS KLWVYIKANK 
LQDAANKRMI NADAKLKEVF GKPQVSMFEM AGLIGKHVK