| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4617 |
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| Symbol | |
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| ID | 5750207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5078098 |
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| End bp | 5079513 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641299720 |
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| Product | isocitrate lyase |
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| Protein accession | YP_001565631 |
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| Protein GI | 160900049 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2224] Isocitrate lyase |
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| TIGRFAM ID | [TIGR01346] isocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.417878 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00173468 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGGTCTT CTATAAGACT TAAATTTGAT CCCAAGGCCG ACGCAAGAAA GCCGCTTGTT
TCAACCACCT CCCAGGAGAG CAACATGCCC CAATCCCTGA CCCAGCAACT GAGCCGTGAA
CAGCAGATTT CCGCCCTTGA GAAAGACTGG GCGCAAAACC CCCGTTGGAA GGGCGTCAAG
CGCGGCTACA GCGCCGCCGA CGTGGTGCGC CTGCGCGGCA GCCTGCAGCC CGAGTACACG
CTGGCCCAGC GTGGCGCGGA ACTGCTCTGG GACAGGATCA ACGGCGGTGC CAAGAAGGGC
TACGTGAATG CCTTTGGCGC CATCTCCGCA GGCCAGGCCA TGCAACAGGC CAAGGCTGGC
CTGGAAGCGG TGTACCTGTC GGGCTGGCAG GTGGCTGCCG ACGGCAACAC CAGCGAAACC
ATGTACCCCG ACCAGTCGCT GTACGCCTAT GACTCGGTGC CCACCATGGT GCGCCGCATC
AACAACACCT TCAAGCGTGC CGACGAAATC CAGTGGGGCC GGGGCATCAA CCCCGGCGAC
AAGGAATTCA TCGACTACTT CCTGCCTATC GTCGCCGATG CGGAAGCCGG TTTTGGCGGC
GTGCTCAACG CTTTTGAACT GATGAAGAAC ATGATTGCCG CTGGCGCAGC CGGCGTGCAC
TTCGAGGACC AACTGGCTGC CGTGAAGAAG TGCGGCCACA TGGGCGGCAA GGTTCTGGTG
CCCACCCAGG AAGCCGTCGA GAAGCTGATC TCCGCCCGCT TTGCCGCTGA CGTGATGGGC
GTGCCTACCA TCGTGCTGGC CCGCACCGAT GCTGAAGCCG CCAACCTGAT CACCTCCGAT
CACGACGCCA ACGACAAGCC GTTCCTGACC GGCGAGCGCA CGCAGGAAGG CTTCTACCGT
GTCCGCAATG GCATGGAGCA GTCCATCAGC CGCGGTGTGG CCTATGCGCC CTATGCCGAC
CTGGTGTGGT GCGAAACCGG CGTGCCCGAC ATCGGCTTTG CCCGCGAGTT CGCCCAGGCC
GTGCATGCCG CCTGCCCAGG CAAGCTGCTG AGCTACAACT GCTCGCCTTC GTTCAACTGG
AAGAAGAACC TCAACGACAG CCAGATCGCC TCCTTCCAGG AAGACCTGTC TGCTCTGGGC
TACAAGTTCC AGTTCATCAC GCTGGCCGGC ATTCACATCA ACTGGTTCAA CACGTTCAAG
TTTGCCCACG CCTACGCCAA CGGCGAAGGC ATGAAGCACT ACGTGAACAT GGTGCAGGAG
CCCGAATTCG CAGCCCGCGA ACAAGGCTAC ACCTTCGTGT CGCACCAGCA GGAAGTGGGT
GCAGGCTACT TCGACGACGT GACCACGGTG ATCCAGGGCG GCTCGTCCAG CGTCAAGGCA
CTGACCGGCT CCACGGAAGA GGAGCAATTC CACTGA
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| Protein sequence | MRSSIRLKFD PKADARKPLV STTSQESNMP QSLTQQLSRE QQISALEKDW AQNPRWKGVK
RGYSAADVVR LRGSLQPEYT LAQRGAELLW DRINGGAKKG YVNAFGAISA GQAMQQAKAG
LEAVYLSGWQ VAADGNTSET MYPDQSLYAY DSVPTMVRRI NNTFKRADEI QWGRGINPGD
KEFIDYFLPI VADAEAGFGG VLNAFELMKN MIAAGAAGVH FEDQLAAVKK CGHMGGKVLV
PTQEAVEKLI SARFAADVMG VPTIVLARTD AEAANLITSD HDANDKPFLT GERTQEGFYR
VRNGMEQSIS RGVAYAPYAD LVWCETGVPD IGFAREFAQA VHAACPGKLL SYNCSPSFNW
KKNLNDSQIA SFQEDLSALG YKFQFITLAG IHINWFNTFK FAHAYANGEG MKHYVNMVQE
PEFAAREQGY TFVSHQQEVG AGYFDDVTTV IQGGSSSVKA LTGSTEEEQF H
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