| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4616 |
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| Symbol | thrS |
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| ID | 5750206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 5075858 |
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| End bp | 5077789 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641299719 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_001565630 |
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| Protein GI | 160900048 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00213357 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCCACA TTACGCTTCC CGATGGTTCG CAACGTGAGT ACCCCGGCCC GGTCACCGTG
GCTGAAGTGG CTGCATCGAT AGGTACGGGC CTTGCCAAGG CTGCGCTGGC TGGCAAGGTT
GGCACGGGCG ACGACGCCAA GGTGGTGGAC ACCAGCTTTG TGATCAACAA GGACATGCCC
CTGTCCATCG TGACGGCCAA GGATGCAGAT GGCCTGGACG TGATCCGCCA TTCGACGGCC
CACTTGCTGG CCTATGCCGT CAAGGATCTG TTTCCTGACG CCCAGGTCAC CATCGGTCCC
GTGATCGAGA ACGGCTTCTA CTACGACTTC TCGTACAAGC GCCCCTTCAC GCCCGAGGAC
CTGGTCGCCA TCGAAAAGCG CATGGCCGAA CTGGCCGCCA AGGACGAGCC CGTGGTGCGC
CGCGTGCTGC CGCGCGACGA GGCCGTTGCG TACTTCAAGG GCATCGGCGA GAACTACAAG
GCCGAGATCA TCGCCAGCAT CCCCTCCAAT GAGGATGTGA GCCTGTACCG CGAAGGCAGC
TTCGAGGATC TGTGCCGCGG CCCGCACGTG CCCAGCACCG GCAAGCTCAA GTTCTTCAAG
CTGATGAAGG TGGCTGGCGC CTACTGGCGT GGCGACCATC GCAACGAGAT GCTGCAGCGC
GTGTACGGCA CGGCCTGGGC ATCTAAGGAC GACCTGCAGC AGTACCTGCA CATGCTGGAG
GAGGCTGAGA AGCGCGACCA CCGCAAGCTG GGCCGCGAAC TGGACCTGTT CCACATCGAC
GAGCATTCGC CGGGCACCGT GTTCTGGCAC CCGAAGGGCT GGTCCCTGTG GCAAGAGGTC
GAGCAGTACA TGCGCCGCGT GTACCGCGAC AACGGCTACC AGGAGGTCAA GGGTCCGCAG
ATCCTGGACA AGACCCTGTG GGAGAAGACC GGCCACTGGG ACAAGTACCG CGAGAACATG
TTCACGACCG AGTCGGAAAA GCGCGACTAT GCGCTCAAGC CGATGAACTG CCCCGGCCAC
ATCCTGATCT TCAAGCAGGG CATCAAGAGC TACCGCGACC TGCCGCTGCG CTACGGCGAA
TTCGGCCAGT GCCACCGCAA CGAGCCCACG GGCGGCCTGC ACGGCATCAT GCGCGTGCGC
GGCTTCACGC AGGATGATGG CCACGTCTTC TGTACCGAAG ACCAGATCCA GCCCGAAGTG
CTGGCCTTCA CCACGCTGCT GCAAAAGGTC TACGCGGACT TCGGCTTCAG CGACATCATC
TACAAGGTCG CCACGCGCCC CGAAGCGCGC ATCGGCTCCG ATGAAAGCTG GGACAAGGCA
GAAGCTGCGC TGATCAACAG CCTGGAGGCT TCGGGCTGCG AGTACGTGAT CTCGCCCGGC
GATGGCGCTT TCTACGGCCC CAAGATCGAG TACACGCTCA AGGACGCCAT CGGCCGCCAG
TGGCAGTGCG GAACCATCCA GGTGGATTTC TCCATGCCCG AGCGCCTGGA TGCGGAGTAC
GTGGGCGAGG ATGGCGACCG CCATCGCCCC GTGATGCTGC ACCGTGCCAT CGTTGGCAGC
CTGGAGCGTT TCATCGGCAT TCTCATCGAG CAGCACGCTG GCGCCATGCC GACCTGGCTG
GCTCCCGTGC AGGCCGCTGT TCTCAATATC ACCGACGCGC AGGCGGACTA TGTGCGGGAA
GTCGCACAAA AGCTGCAAAA AGCATTTCCG AATCAAGGCC TTAGGGTGGC GACAGATCTG
CGCAACGAAA AGATTACGTA TAAAATACGG GAGCATTCGT TGCAAAAGCT GCCTTACATC
CTTGTTGCTG GCGACAAGGA GAAGGCCGCT GGTGCAGTGG CAGTGCGCGC ACGGGGCAAC
AAGGACCTCG GTGTGATGTC GGTCGATGCG TTCATTGAAC TCGTGGCCAA GGACATCGCG
GCGAAGGCCT GA
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| Protein sequence | MIHITLPDGS QREYPGPVTV AEVAASIGTG LAKAALAGKV GTGDDAKVVD TSFVINKDMP
LSIVTAKDAD GLDVIRHSTA HLLAYAVKDL FPDAQVTIGP VIENGFYYDF SYKRPFTPED
LVAIEKRMAE LAAKDEPVVR RVLPRDEAVA YFKGIGENYK AEIIASIPSN EDVSLYREGS
FEDLCRGPHV PSTGKLKFFK LMKVAGAYWR GDHRNEMLQR VYGTAWASKD DLQQYLHMLE
EAEKRDHRKL GRELDLFHID EHSPGTVFWH PKGWSLWQEV EQYMRRVYRD NGYQEVKGPQ
ILDKTLWEKT GHWDKYRENM FTTESEKRDY ALKPMNCPGH ILIFKQGIKS YRDLPLRYGE
FGQCHRNEPT GGLHGIMRVR GFTQDDGHVF CTEDQIQPEV LAFTTLLQKV YADFGFSDII
YKVATRPEAR IGSDESWDKA EAALINSLEA SGCEYVISPG DGAFYGPKIE YTLKDAIGRQ
WQCGTIQVDF SMPERLDAEY VGEDGDRHRP VMLHRAIVGS LERFIGILIE QHAGAMPTWL
APVQAAVLNI TDAQADYVRE VAQKLQKAFP NQGLRVATDL RNEKITYKIR EHSLQKLPYI
LVAGDKEKAA GAVAVRARGN KDLGVMSVDA FIELVAKDIA AKA
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