Gene Daci_4612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4612 
SymbolpheS 
ID5750202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5073204 
End bp5074256 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content64% 
IMG OID641299715 
Productphenylalanyl-tRNA synthetase subunit alpha 
Protein accessionYP_001565626 
Protein GI160900044 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0016] Phenylalanyl-tRNA synthetase alpha subunit 
TIGRFAM ID[TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0298784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0183673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGT TGGATTCTCT GGTCGAGAGC GCGCAGCAGC TGTTCGCGCA GGCACAAACC 
CCCGCTGATC TGGAAAACGC CAAGGCGCAG TTTCTGGGCA AGTCGGGCAA GGTGACCGAG
CTCATGAAGG GCATGGCGCA GCTTTCCGTC GAAGAGAAGA AGTCGCGCGG AGCCGCCATC
AATGTGGCCA AGCAAGGCAT CGAGGCCGCG CTGACCGCGC GCCGCAAGGC CCTGGCCGAT
GCCGAACTGC AGGCCCACCT GAAGGCCGAG GTGCTGGATG TGACCTTGCC GGGCCGCCGC
CGTGGCCAGG GTGGCCTGCA CCCCGTGTCG CTGACGCTGG AGCGCATCGA GGGCATCTTC
GGCTCCATGG GCTTCGATGT GGCCGAGGGC CCCGAGATCG AGTCCGACTG GTTCAACTTC
ACGGCGCTGA ACACGCCGGA AGACCATCCC GCCCGTTCCA TGCACGACAC CTTCTACGTG
GAAGGCGGCA CGGAGCAGGC CCCCAATCTG CTGCGCACGC ACACCAGCCC CATGCAGGTG
CGCCACGCTG TGCAGCACGT CAAGAAATAC CGTGAGCGGC TCGACGCCGG CCAGGGCATG
CCCGAGATCC GCGTGATCGC GCCGGGCCGC ACCTACCGCG TGGACAGCGA TGCCACGCAC
TCGCCCATGT TCCACCAGTG CGAAGGCCTG TGGATCGGTG AGAACGTCAG CTTCAAGGAC
CTGAAGGTGG TCTTCACCGA CTTCTGCAAG ACCTTCTTCG AGAGCGACGA CCTGGTGCTG
CGCTTCCGTC CCAGCTTCTT CCCCTTCACC GAGCCCAGCG CCGAGATCGA CATCCAGTTC
CAGAGCGGCC CCTTGGCCGG CCGCTGGCTG GAAGTGGCCG GCTCCGGCCA GGTGCACCCC
AACGTGGTGC GCAACATGGG GCTGGACCCC GAAAAGTACA TCGGCTTTGC CTTTGGCATG
GGGCCTGACC GCCTGACCAT GCTGCGCTAT GGCGTCAACG ATCTGCGACT GTTTTTTGAC
GGCGATATCC GCTTCCTGTC GCAATTCCGT TGA
 
Protein sequence
MNELDSLVES AQQLFAQAQT PADLENAKAQ FLGKSGKVTE LMKGMAQLSV EEKKSRGAAI 
NVAKQGIEAA LTARRKALAD AELQAHLKAE VLDVTLPGRR RGQGGLHPVS LTLERIEGIF
GSMGFDVAEG PEIESDWFNF TALNTPEDHP ARSMHDTFYV EGGTEQAPNL LRTHTSPMQV
RHAVQHVKKY RERLDAGQGM PEIRVIAPGR TYRVDSDATH SPMFHQCEGL WIGENVSFKD
LKVVFTDFCK TFFESDDLVL RFRPSFFPFT EPSAEIDIQF QSGPLAGRWL EVAGSGQVHP
NVVRNMGLDP EKYIGFAFGM GPDRLTMLRY GVNDLRLFFD GDIRFLSQFR