Gene Daci_4610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4610 
SymbolihfA 
ID5750200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5070315 
End bp5070647 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content63% 
IMG OID641299713 
Productintegration host factor subunit alpha 
Protein accessionYP_001565624 
Protein GI160900042 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00987] integration host factor, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.428618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0608017 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGA CGGTGGAAAG TCTTGATTCG CCCGCGCTGA CCAAGGCGCA GCTGGCGGAC 
CTGCTGTTCG ACGAGATCGG CCTGAACAAG CGCGAATCCA AGGAAATGGT GGATGCGTTC
TTCGAGCTGA TCTCGCAAAG CCTGGTGACG GGCGAGGATG TGAAGCTGTC GGGCTTCGGC
AACTTCCAGA TCCGCACCAA GGCGCCGCGT CCGGGGCGCA ACCCGCGCAC TGGCGAGGCC
ATTCCGATCG AGGCACGCCG CGTCGTGACC TTCCATGCGA GCAGCAAGCT CAAGGAGCAG
ATCCAGGAAG GCACGACGGG TTCCGCGTCC TGA
 
Protein sequence
MELTVESLDS PALTKAQLAD LLFDEIGLNK RESKEMVDAF FELISQSLVT GEDVKLSGFG 
NFQIRTKAPR PGRNPRTGEA IPIEARRVVT FHASSKLKEQ IQEGTTGSAS