Gene Daci_4581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4581 
Symbol 
ID5750169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5040170 
End bp5040934 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content74% 
IMG OID641299682 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001565595 
Protein GI160900013 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG CCGGCCTGGA GCGGGACTTC GACGGCCGCA CGGCCCTGGT CACCGGCGGC 
GCGGGCGGCA TCGGCCTGGC GATTGCCCGG CAGCTCGCCG AAGGAGGTGC GCGTGTCGTC
CTGCTGGACC TGGAGCGGCA GGCACTGGAC GTGGCCGCTG CCAGCCTGGC GGAGCCCCGG
CACCACCTGG CGCTGGAGGT GGATGTGACC AGGCCCGAGG GCGTGGAGCA GGCGGTGGCC
ACGGTGCTGG AGGCCACGGG CCGCATCGAC ATCCTGGTCA ACAGCGCCGG CGTGGCGCTG
CTGGAGCCGG CCGGCGAAGT CAGCGAGGCG GCGTGGGATC GCACGCTGGC CGTCAACCTC
ACGGCGCCGC TGCTGCTGGC CCAGGCGGTG GCACCGGCCA TGCGCCGCCA GCGCCACGGA
CGCATCATCA ACCTGGCCTC GCAGGCCAGC GTGGTCGCGC TCCGGCGCCA TGCCGCCTAT
TGCGCCAGCA AGGCGGGCCT GGTGGGGCTG ACGCGCGTGC TGGCGCTGGA GTGGGCGTCC
GACGGCATCA CCGTCAACGC CATCTCGCCG ACCGTGGTGG ACACGCCGCT GGGCCGCAAG
GCCTGGGCCG GGCAGGTGGG GGAGGCCATG CGGGCACTCA TCCCCACGGG CCGCTTTGCG
CAGCCCGAGG AGGTGGCGCG GCTGGCCGTG TTCCTGGCCG GTACGCACGC CGGCATGCTG
ACGGGCGAGA ACATCGTCAT CGACGGGGGC TACTCCATCC AGTGA
 
Protein sequence
MSAAGLERDF DGRTALVTGG AGGIGLAIAR QLAEGGARVV LLDLERQALD VAAASLAEPR 
HHLALEVDVT RPEGVEQAVA TVLEATGRID ILVNSAGVAL LEPAGEVSEA AWDRTLAVNL
TAPLLLAQAV APAMRRQRHG RIINLASQAS VVALRRHAAY CASKAGLVGL TRVLALEWAS
DGITVNAISP TVVDTPLGRK AWAGQVGEAM RALIPTGRFA QPEEVARLAV FLAGTHAGML
TGENIVIDGG YSIQ