Gene Daci_4580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4580 
Symbol 
ID5750168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5039141 
End bp5040121 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content69% 
IMG OID641299681 
Productmonosaccharide-transporting ATPase 
Protein accessionYP_001565594 
Protein GI160900012 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAATC TTCAAGCTGC ATCTTCGCCG CCGCTCTTGG GGCGGCGCGC GCTGGACCTG 
CGCAGCCTGC GCGAGCGCTA CGGCGTGGTC ATCGCGCTGA TTGCACTGTG CGCGGCGCTG
GCGCTGGCCA ACCCCCATTT CATGACCTGG GGCAACTGGG CCGACATCCT GCGCCAGACC
TCCATCAACG GCATTCTGGC CATCGGCATG ACGTGCGTGG TGCTGACGGC GGGCATCGAC
CTGTCGGTGG GCGCCATCCT GGCGCTGGCC GGCATGGTCG GCGCCTGGCT GGCGGCCGAT
GGCCAGGGGC TGGCGGTGAG CGTGGGCGCC GGGCTGGGCG TGGGCATGCT GCTGGGCGGC
GTCAACGGCC TGCTGGTGGC CTGGTTCGCG GTGCCGCCCT TCGTTGCCAC GCTGGGCATG
CTGAGTGCGG CGCGCGGCCT GACCTACATC TACAACGACG GCATGCCGGT GTCCGAGCTG
CCCGACGGCT TTCTTGCCAT CGGCGCCGGC CAGCTGGGAC CCGTGCCCAT GCCCATCGTG
ATCTTTGCCG TTGCCGTCGC GGTGTTCGCC TTCGTGCTGC GCTACACCGT GTATGGCCGC
TATATCTACG CCGTGGGCGG CAACCTGCGC AGCGCCAAGA CCAGCGGCAT CAACACCCGG
GCCATCGTGC TGCTGGTCTA TGTGGTCAGC GGCCTGCTCG CGGGGCTGGC CGGCATTTTG
CTGGCATCGC GCACCACGGC GGCGCTGCCG CAGGCCGGCG TGTCCTACGA GCTGGACGCC
ATTGCGGCCG TGGTGATTGG CGGCACCAGC CTGTCGGGCG GCACGGGCAG CCTGGGCGGC
ACGGTCGTCG GCGCCCTGCT CATCGGCGTG ATCAACAACG GGCTGAACCT GCTGGGCGTG
TCCTCGTACT ACCAGCAGCT GATCAAGGGC GTGATCATCG TCGGCGCCGT GCTGCTTGAC
AGTTCACGCC GCAGGGCATG A
 
Protein sequence
MTNLQAASSP PLLGRRALDL RSLRERYGVV IALIALCAAL ALANPHFMTW GNWADILRQT 
SINGILAIGM TCVVLTAGID LSVGAILALA GMVGAWLAAD GQGLAVSVGA GLGVGMLLGG
VNGLLVAWFA VPPFVATLGM LSAARGLTYI YNDGMPVSEL PDGFLAIGAG QLGPVPMPIV
IFAVAVAVFA FVLRYTVYGR YIYAVGGNLR SAKTSGINTR AIVLLVYVVS GLLAGLAGIL
LASRTTAALP QAGVSYELDA IAAVVIGGTS LSGGTGSLGG TVVGALLIGV INNGLNLLGV
SSYYQQLIKG VIIVGAVLLD SSRRRA