Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4568 |
Symbol | |
ID | 5750156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 5025663 |
End bp | 5026868 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641299669 |
Product | major facilitator transporter |
Protein accession | YP_001565582 |
Protein GI | 160900000 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.368636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCAG AACAACACAC TCCAGCGCTG CAGCGCCGCA ACCTCGGCCT GCTCGTGGCC GCGCAATCGC TGGGGGGCGC GTCGCCGCCC ATCATCATTT CGCTGGGCGG CCTGGTCGGC CAGCAGCTGT CCACCAATCC CACGGCCACC ACGCTGCCGG TCAGCATCTA CCAGCTGGGC CTGGCGCTGT CCACGCTGCC CGCGGCCTGG CTGATGCAGC GCATGGGGCG GCGCACGGCC TATGTGCTGG GAGCCATCCT GGGCGTGGTC TCGGGCGTGA TCGCGGCCCA GGGCATTGCG CAATCGGACT TCGTGACCTT CTGCATCGGC ACGGCGCTGG CGGGCTTTTA CGCGGCCTGC GTGCAGAGCT ACCGCTTTGC GGCCACCGAC GCCATGACCG ACCCCGCCGA GCAGGCGCGC GCCATCTCGC GCGTGATGAT CGGCGGGCTG ATCGCGGCCA TCATCGGCCC GCAGGTGGTG ATCTGGACGC GCGACGCCCT GCCCATGACG CCGTTCGCCG GCAGCTTCTA CAGCCAGGCC GTGCTCGCCC TGCTGGCCCT GCCGTTGCTG CTGGGCCTGA AGCTGCCGCC GCCCCAGGCC CGCGCCGTGG CGGGCGAGGC CCGGCCGCTG GCCGAGATTG CGCGCACGCC GCAGTTCATC GTGGCGGCTT CGGCCGGCGT GGTCAGCTAC GGTCTCATGG CCTTTCTGAT GACGGCCGCG CCCATGGCCA TGGTGGGCTG CGGCCACACG GTGGGCGAGG CGGCGCTGGG CATCCAGTGG CATGTGCTGG CCATGTTCGC GCCCAGCTTC TTCACGGGCC GGCTGATCGC GCGCTTTGGC AAGCGCCGCA TCACGGCGCT GGGGCTGGTG ATGATCGCGG CCTCGGCCCT GATGGCGCTG ATGGGGCTGG AGCTGCTGCA CTTCTGGGGC TCCCTGGTGC TGCTGGGCGT GGGCTGGAAC TTCGGCTTCA TCGGCGCCAC GGCCATGGTG ACCGAGTGCT ACCGCCCTGC CGAGCGCGCC AAGGTGCAGG CCCTCAATGA CTTCCTGGTC TTCGGCACCG TGGCCGTGGC CTCGTTCGGC TCGGGCCAGC TGCTGCACAC GGCCGGCTGG GACGGCATCA ACACCTGGCT GCTGCCCATC GTGGGCGTGG TGCTGCTGAT GCTGGCCGTG CAGGGACGGG GTCGCGGCGC GGGCGCGCCG GCCTGA
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Protein sequence | MTPEQHTPAL QRRNLGLLVA AQSLGGASPP IIISLGGLVG QQLSTNPTAT TLPVSIYQLG LALSTLPAAW LMQRMGRRTA YVLGAILGVV SGVIAAQGIA QSDFVTFCIG TALAGFYAAC VQSYRFAATD AMTDPAEQAR AISRVMIGGL IAAIIGPQVV IWTRDALPMT PFAGSFYSQA VLALLALPLL LGLKLPPPQA RAVAGEARPL AEIARTPQFI VAASAGVVSY GLMAFLMTAA PMAMVGCGHT VGEAALGIQW HVLAMFAPSF FTGRLIARFG KRRITALGLV MIAASALMAL MGLELLHFWG SLVLLGVGWN FGFIGATAMV TECYRPAERA KVQALNDFLV FGTVAVASFG SGQLLHTAGW DGINTWLLPI VGVVLLMLAV QGRGRGAGAP A
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