Gene Daci_4563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4563 
Symbol 
ID5750151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5019980 
End bp5020969 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content70% 
IMG OID641299664 
Producthypothetical protein 
Protein accessionYP_001565577 
Protein GI160899995 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.011816 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCAC CCGTGTCCCG CCGCCTGCTC GTCTGCTGCG CCGCCCTGTT GACCTGCGCC 
ACGCCCGGCT GGGCCGCGCC CGCCGCCGAT GCCTGGCCCT CGCAGCCGCT GAAGATCATG
GTGGGCTTTG CCGCCGGCGG CGCCAACGAC ATCGTGGCCC GCATCCTGGC CAAGGAGCTG
CAGCAGCGCC TGGGCCAGAG CGTGGTGGTG GAGAATCGCG GCGGCGCGGG CGGCCTGATC
GCCAGCGAAG TGGTGGCCAA GGCGCCCAAG AACGGCTGCA CGCTGCTGCT GGGCTCCATC
GGCAGCAACA CCGTGGCGCC CGTGCTGGCC AAGAAGCTGT CGTTCGACCC GCGCAAGGAC
CTGGAGCCCA TCACCCTGGT GGCCGAGTCC GGCAACGCGC TGCTGGTGAA CGCCGCCCTG
CCCTACAAGA CGGTGCAGGA AATGATCGAG GCCGCGCGCA AGGCGCCGGG CAGCATCAAC
TACGCATCGT CGGGCAACGG CTCCACGCTG CACCTGGCAG GCGCGCTGTT CGCGCAGCAG
GCCGGCGTGA ACCTCGTGCA CGTGCCCTAC CGCGGCAACG GCCCGGCCAT CACCGATGTG
TCGGGCGGCC AGGTGCAGGC CATCTTCTCG GGCATTCCGC CCGCCATCAC CTCGGCCAAG
ACCGGCCAGA CCCGCATCCT GGCCGTGACC ACGAAGCAGC GCGTCAAGAA CCTGCCCAAC
GTGCCCACCG TCGCCGAGGC CGGTCTGCCC GGCTATGCCT TCACGTCCTG GTACGGCCTG
TTCACCACGG GCGGCACGGA CCCGGCCATC GTCGAGCGGC TGGCCCAGGA AGTGCGCAAG
ATCATGGAGC GCCCCGAAGT GCAGGCCCAG TTCGAGGCCC AGGGCCTGGA CCCCGAGACC
AGCGACCCCA AGTCCTTCAA GCAGCAGATC GACCGCGAGC TGACGCGCTG GAGCCGCGAC
GTGAAGACCA TGGGCATCAC CGCCGACTGA
 
Protein sequence
MPAPVSRRLL VCCAALLTCA TPGWAAPAAD AWPSQPLKIM VGFAAGGAND IVARILAKEL 
QQRLGQSVVV ENRGGAGGLI ASEVVAKAPK NGCTLLLGSI GSNTVAPVLA KKLSFDPRKD
LEPITLVAES GNALLVNAAL PYKTVQEMIE AARKAPGSIN YASSGNGSTL HLAGALFAQQ
AGVNLVHVPY RGNGPAITDV SGGQVQAIFS GIPPAITSAK TGQTRILAVT TKQRVKNLPN
VPTVAEAGLP GYAFTSWYGL FTTGGTDPAI VERLAQEVRK IMERPEVQAQ FEAQGLDPET
SDPKSFKQQI DRELTRWSRD VKTMGITAD