| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4545 |
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| Symbol | |
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| ID | 5750133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4997105 |
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| End bp | 4998799 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641299646 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001565559 |
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| Protein GI | 160899977 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.18473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCCC AGCCCGCGCA CCACGCTTTC TGGCCCAGCC GCCTGCCCCA TTCCATCACC
GTGCCCGCCA CCAGCGTCTG GGACAACCTG GCCGTCAATG CGCGACGCTA CCCGGACAAG
GCAGCCATCC GCTACTTCGG CAGCTCCATC AGCTACCGCG AGCTGTGCGA GGGCACGGAG
CGCATGGCGG CCTACCTGCA CAGCCTGGGC GTGCAGCGCG GCGACCGCGT GATCCTGCTG
ATGCAGAACA CGCCCCAGCT CATCCTGGCG CACTACGCCA TCTTCCGCGC CAATGCGGTG
GTGGTGCCGG TCAATCCCAT GAACATGGCC GAGGAGCTCA GGCACTACAT CACCGACGCC
GACGCCAAGG TCGCCATCAC CACGGCCGAC CTGGCCCCCG AACTGGCCAA GGCCAGCAAT
GCGCTGGCGC CCGGCCAGCG GCTGGAGCAC CTGGTCGTCA CCCAGTTCAC GGACGCCTTC
GATGCCGGGG TGCAGGGCGA CGACGCCCCG CCCGTGCAGT GGCACGACTG GCTGCTCACC
CGGCGTGAGC CGGCCGTGCT CGATGGCGGC AGCGTCCACA CCTGGCAGCA GGCCCTGGCC
TGCAACGACG CCGCGCCGCC CCATGTGGTG GGCCGCGACG ACATGGCCGT GCTGCCCTAC
ACCAGCGGCA CCACGGGCCA CCCCAAGGGC TGCATGCACC CGCACCGCTC CATCAACCAC
AACGCCGTGG CGGGCAGCTA CTGGGGCAGC GGCACCAGCG AGACCGTGGT CCTGGCCGTC
GTGCCCATGT TCCACATCAC GGGCATGGTC TCGGTGCTGC ACACGGCCAT CTTCGTGGGC
GCCACCCTGG TCGTCATGCC GCGCTGGGAC CGCGAGCTGG CGGGGCGGCT GATCTCTCGC
TACCAGGTCA CCAGCTGGAC CAACATCCCC ACCATGGTCA TCGACCTGCT GGGCAGCCCC
AACTTTGCGC AGTTCGACCT CACCAGCCTC AAGTACATCG GCGGCGGTGG TGCGGCCATG
CCACAGGCCG TGGCCCAGCG CCTGCTGGAG CAATACGGCC TGCGCTTCAG CGAGGGCTAC
GGCCTGACCG AGACGGCCGC GCCCACGCAC AGCAACCCGT TCGAGCATCC CAAGCAGCAA
TGCCTGGGCA TTCCCTTCAT GAGCACCGAG GCGCGTGTCA TCGACCCCGA AACCGGCGCC
GATGTCCCGC AGGGCGAGCA GGGCGAAATC GTCGTCCACG GCCCCGAGGT CTTCGACGGC
TACTGGAAGC GACCCGACGC CACGGCCCAG GTCTTCATGG AGATCGACGG CAAGCGGTTC
TTTCGCACCG GCGACCTGGG CCACGTGGAC GAGGACGGCT ACTACTTCAT CACCGACCGC
CTCAAGCGCA TGATCAACGC CAGCGGCTTC AAGGTCTGGC CGGCCGAGGT CGAATCGCTG
ATGTTCCGCC ACCCCGCCAT CCAGGAAGCC TGCGTGATCT CCACGCGCGA CGCCTACCGC
GGCGAGTCGG TCAAGGCCGT CGTCGTGCTG CGTGCCGGCA AGGAAGACAC CACGGCCGAG
GACATCATCC AGTGGTGCCG CGAGAACATG GCCGTCTACA AGGCGCCCAA GATCGTGCAG
TTCGTCAAGG CCCTGCCCAA GAGCGGCAGC GGCAAGGTGA TGTGGCGGCA ACTGCAGGAG
GCGGAGGCCG GCTGA
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| Protein sequence | MPSQPAHHAF WPSRLPHSIT VPATSVWDNL AVNARRYPDK AAIRYFGSSI SYRELCEGTE
RMAAYLHSLG VQRGDRVILL MQNTPQLILA HYAIFRANAV VVPVNPMNMA EELRHYITDA
DAKVAITTAD LAPELAKASN ALAPGQRLEH LVVTQFTDAF DAGVQGDDAP PVQWHDWLLT
RREPAVLDGG SVHTWQQALA CNDAAPPHVV GRDDMAVLPY TSGTTGHPKG CMHPHRSINH
NAVAGSYWGS GTSETVVLAV VPMFHITGMV SVLHTAIFVG ATLVVMPRWD RELAGRLISR
YQVTSWTNIP TMVIDLLGSP NFAQFDLTSL KYIGGGGAAM PQAVAQRLLE QYGLRFSEGY
GLTETAAPTH SNPFEHPKQQ CLGIPFMSTE ARVIDPETGA DVPQGEQGEI VVHGPEVFDG
YWKRPDATAQ VFMEIDGKRF FRTGDLGHVD EDGYYFITDR LKRMINASGF KVWPAEVESL
MFRHPAIQEA CVISTRDAYR GESVKAVVVL RAGKEDTTAE DIIQWCRENM AVYKAPKIVQ
FVKALPKSGS GKVMWRQLQE AEAG
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