Gene Daci_4541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4541 
Symbol 
ID5750129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4994400 
End bp4994885 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content69% 
IMG OID641299642 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001565555 
Protein GI160899973 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.417251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGA ACAGCCAATT CTCGGACGTC CTCCATGTGC TGCTGCACAT GGCCGAGGGC 
GATGGACCTG CCACCTCCGA CATGCTCGCC GCCGCGCTGC AAACCAACCC GGTCGTGCTG
CGCCGGTTGA TGTCGGGCCT GCGCGATGCA GGCCTTGTCA CCTCCGCCAA GGGCCACGGC
GGGGGCTGGG TGCTTTCTTG CGAACTGGAC CGCACCACGC TGCGCGACGT GCATGAGGCC
CTGGGCGCCC CCGGCCTGGT GGCGCTGGGC TTCAGGGAAG ACCGGCCCGA ATGCCTGGTC
GCCCAGGCCG TGAACGAAGC CCTGAGCGAC GCCGTGCAGC AGGCCGAGGC CGCCCTGCTT
GCACGCCTGG GCACGGTGAC GCTGGCTGCC CTGTCCCATG ACTTCCACGC CCGCCTGGCC
CGCCATCGCG CAGCAGGCGG CCAGGGTTGG CACCAACTGC AGGAGCACTC GCATGAAACA
CGTTGA
 
Protein sequence
MKQNSQFSDV LHVLLHMAEG DGPATSDMLA AALQTNPVVL RRLMSGLRDA GLVTSAKGHG 
GGWVLSCELD RTTLRDVHEA LGAPGLVALG FREDRPECLV AQAVNEALSD AVQQAEAALL
ARLGTVTLAA LSHDFHARLA RHRAAGGQGW HQLQEHSHET R