Gene Daci_4537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4537 
Symbol 
ID5750125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4989168 
End bp4990055 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content66% 
IMG OID641299638 
Productamidohydrolase 2 
Protein accessionYP_001565551 
Protein GI160899969 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.136824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCACG AAAAGCTCAT TGCCATCGAC ATCCACACGC ACGCCGAGGT GAGCTGCTGG 
AACCCGTTCG ACAACTACGG CGAGGAGTAC GACCGCGCCG CCGACAAGTA CTTCGGCAAC
GGCCGGCGCC CGACCATCGC CGAGACCGTG GCCTACTACC GCGAGCGCAA CCTGGGCCTG
GTGATGTTCA CGGTGGACAG CGAGTCGCAG CTGGGCCGGC GCCGCATTCC CAACGAGGAG
ATCGCCGAGG CTGCGCGGTC CAACAGCGAC ATGATGGTGG CCTTCGCCAG CATCGATCCG
CACAAGGGCC GCATGGGTGC GCGCGAGGCG CGGCGGCTGA TCGAGGAAGA GGGCGTCAGG
GGCTTCAAGT TCCACCCCAC GGTGCAGGGC TTCCATCCCT ACGACCGCAT GGCCTGGCCG
ATCTACGAGG TGGTGGCCGA GTACCAACTG CCGGCCATCT TCCACACGGG CCACAGCGGC
ATAGGCAGCG GCATGCGCTG CGGCGGCGGC CTGCGCCTGG CCTACAGCAA TCCCATGCAC
CTGGACGACG TGGCCATCGA CTTTCCCGAC ATGCAGATCG TGATGGCCCA TCCCAGCTTT
CCCTGGCAGG ACGAGGCCCT GTCCGTGGCC CTGCACAAGC CCAATGTCTG GATCGATCTG
TCGGGCTGGA GCCCCAAGTA CTTTCCCCGG CAGCTGGTGC AGTACGCCAA CACCCTGCTC
AAGGATCGCG TGCTCTTCGG CAGCGACTAT CCGCTGATCA CGCCCGAGCG CTGGATGAAG
GATTTCCAGG AGGCCGGCTT CAAGCCCGAG GTGATGCCCG GCATCCTCAA GGGCAACGCG
GTGCGGCTGC TGGGGCTGGA GCAGCCGGCA GCGGAGAAGG CGGACTGA
 
Protein sequence
MDHEKLIAID IHTHAEVSCW NPFDNYGEEY DRAADKYFGN GRRPTIAETV AYYRERNLGL 
VMFTVDSESQ LGRRRIPNEE IAEAARSNSD MMVAFASIDP HKGRMGAREA RRLIEEEGVR
GFKFHPTVQG FHPYDRMAWP IYEVVAEYQL PAIFHTGHSG IGSGMRCGGG LRLAYSNPMH
LDDVAIDFPD MQIVMAHPSF PWQDEALSVA LHKPNVWIDL SGWSPKYFPR QLVQYANTLL
KDRVLFGSDY PLITPERWMK DFQEAGFKPE VMPGILKGNA VRLLGLEQPA AEKAD