| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4533 |
|---|
| Symbol | |
|---|
| ID | 5750121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 4985418 |
|---|
| End bp | 4986074 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641299634 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001565547 |
|---|
| Protein GI | 160899965 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.505005 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAAC GTTCGTTCAT CATTCGGGGC ATGAAAAAGA AAGAAGACAT CAGCGAGCGC
CGGGCTGTCA TCGTGGAGGC CGCCCTGCAG TGTTTCGTGG AGCGCGGCTT TCACTGCACC
AGCATGCGCG ACATCGCGCA GGCTGCCTCG GTGAGCCTGG GCAACCTGTA CAACCACTTC
GACAGCAAGC AGGCCTTGAT TGCCGAGGTT GCCACGCAGG AGCAGACCGA GCTGCTGCCC
TTGCTGCAGG CGCTGGAGCG GGCCGCAGCC CCTTCGCTGC CTGTGGTGGC GCAATTCCTG
GCCGCCTACC AGGCGCTGTG CCGCCAGCGG GAATGGGCCG TGCTCAGCGC CGAATGCCTG
TCCGAGATCG CGCGTTCGCC CGGGCTGGCG CCGGCCTTCG AGGCCAACCG CAGGCGCATG
CTCGACGGCC TGGCAGGCTT CATGGAGCGC GGGGCGCAGC AGGGCCTCTT GCGGCCCGCC
GTGCCCGTGC GCCTGGCCGC GCAACTGCTG CTGGATGCCG TGGAAAGCGA TGCGCTGCGC
TTTGCGCTGG CGGTGACGCC GCAAGAAGAC GCGGGGGCGG ATGAAGGGGT CGATGTGCTG
CATCCCGCCT TGCTGGCCTG CCTTCTTGGA GGCGAGGCAT GGGGGGACGC GACATGA
|
|---|
| Protein sequence | MNERSFIIRG MKKKEDISER RAVIVEAALQ CFVERGFHCT SMRDIAQAAS VSLGNLYNHF
DSKQALIAEV ATQEQTELLP LLQALERAAA PSLPVVAQFL AAYQALCRQR EWAVLSAECL
SEIARSPGLA PAFEANRRRM LDGLAGFMER GAQQGLLRPA VPVRLAAQLL LDAVESDALR
FALAVTPQED AGADEGVDVL HPALLACLLG GEAWGDAT
|
|---|
| |