Gene Daci_4519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4519 
Symbol 
ID5750107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4968537 
End bp4969592 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content71% 
IMG OID641299620 
Productalcohol dehydrogenase 
Protein accessionYP_001565533 
Protein GI160899951 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCAC TGCGCAAGAC CGAGCCGAGC CACGGCCTGA CACTGACCCA AGCGGACATG 
CCCGCGCCCG GCCCTGGCGA AGTGCTGCTG CGCGTGCATT CGGCCGGTGT GTGCGGCACC
GATCTGCACA TTGCCGAATG GACCCGCAGC TACCACTTCC TGACCCCCGC CCTGCCTGTG
ACGATCGGTC ATGAGTTCAG CGGCGAGATT GCCGCGCTGG GCGAAGGTGC CGAGAACCTG
GCCCCGGGCC TGACCGTGGG CCAGATGGTG GCCGTGCGGC CTTCGGTCAC CTGCGGCCGC
TGCGCGGCCT GCACCAGCGG CAACTTCGAT GGCTGCACCA CGCGGCGCGG CATTGGCGTG
CTGCGCAATG GCGGCTTTGC CCCTTGGGCC GCCGTGCCGC TGCGCAACTG CGTGCCGGTC
CCGGCCGGTG TGCAGGGCGA TGTGGCCGCG CTGGCCGAGC CGCTGACCGT GAGCCATGAG
GCCGTGCGCA CGGCCGGCGT GCGCCCCGGC CACCGCGTGC TGGTGCTGGG GCCGGGCAAC
ATCGGCCAGG GCATTGCGCT GTTCGCGCGG GCCGCAGGCG CCGCCCAGGT GGTGGTGGCC
GGGCATGGCG ATGCGCCGCG GCTGGCGGTG TTGCGCGCCA TGGGCTTTGA CGATGTGCTG
GACTTCGAGG GCAGCGATAT GGATGCGGCC CTTGCCCCCT ATCTGGCCCG GGGCCGGTTC
GATGCCGTGA TCGAGGCCAC GGGCGCGGCC GCCGTGATTG CGCCGGCGCT GCGCGCACTC
AAGGTGCATG GCGTGCTGGT GATCACGGGA ATCCATGCAG CGCCCGTGCC CATCGACCTG
ACGGCGCTGG TGCGCAACCA CCAGGAGCTG CGCGGCTCCT ACCGCGCGCC CGAGAGCGCC
TGGCCCGAGG TCGTGCGCTT CATGCAGGAA CATCAGCCCC TGCTGCGCCA GATGATCACG
CACCGCGTGC CGCTGTCGCG TGCCGAGGAA GGCTTTGCGC TGGCGCGCGC GCGCCATGCC
AGCAAGGTGC TGGTGCAGCC GGAGCACCAG GCATGA
 
Protein sequence
MQALRKTEPS HGLTLTQADM PAPGPGEVLL RVHSAGVCGT DLHIAEWTRS YHFLTPALPV 
TIGHEFSGEI AALGEGAENL APGLTVGQMV AVRPSVTCGR CAACTSGNFD GCTTRRGIGV
LRNGGFAPWA AVPLRNCVPV PAGVQGDVAA LAEPLTVSHE AVRTAGVRPG HRVLVLGPGN
IGQGIALFAR AAGAAQVVVA GHGDAPRLAV LRAMGFDDVL DFEGSDMDAA LAPYLARGRF
DAVIEATGAA AVIAPALRAL KVHGVLVITG IHAAPVPIDL TALVRNHQEL RGSYRAPESA
WPEVVRFMQE HQPLLRQMIT HRVPLSRAEE GFALARARHA SKVLVQPEHQ A