| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4518 |
|---|
| Symbol | |
|---|
| ID | 5750106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 4967487 |
|---|
| End bp | 4968407 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641299619 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001565532 |
|---|
| Protein GI | 160899950 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTGC GCCATCTGCG CTATTTCGTC GCCGTGGCCG AGCAGGGCAA CGTCAGCCGC
GCCGCTCGCA AGCTTTTCAT TGCCCAGCCG CCGCTGTCGG CCCAGCTCAA GCAGTTGGAG
GAAGAGGTGG GCGCAGCCCT GTTCACACGC CTGCCGCGCG GCGTGCGGCT CACGCCTGCG
GGCGAGTCCC TGCTGGAAGA CGCGCGCGCC ATTCTTGCGC GCGCCCAGCA GGCCCCGCTG
CGCGCCCGCG AACGCCAGCA AAGCCGCCAG GGCGTGGTTC GCCTGGGCCT GGTTCCGTCG
GCCATGCACT CGGTGTTGCC CGGCCTGCTG CGCCGCATTG CCGACGCCGG CTGGAACCTG
CGCGTGGAAG CCCGCGAGAT GATCACCTCG CAGCAACTGC GCGCCCTGCG CGCCGGAGAG
CTGGACCTGG GCTTCGGGCG CCCCGGCAAG GGCGAGCCCC TGGCCGAGGA AGTGGCCGGC
ATGGACGATC CCTACTGCCT GGCCATGGCG CCATCCCATC CGCTGGCGGC TGGCGAAGGC
GCGCTACCGC TGCAATCTGC TGCGCATGAG CCCTTCGTGG GCTTTGCACG CTACGAGGAC
GCCGACTACT TCGACCGCAC CGTGGCCCTG TGCCTGGATG CGGGCTTCAC CCCTTCCATA
CGCCACGAGG CCGGCCAGTT CGTCAACGTG CTCGCCCTGG TGGCCTGCGG CCTGGGCGTG
GCCATCGTCC CCTCGTCCTT TGCCTCGCTG TACCGGGGCA AGCTGGTGTT CAGGCCGCTG
CAGCAATCGC GCTACCAGAG CCGGCTGGCG GTGCTGGCCG TGGCCGGGTC GACTGACGGC
GAAAGCGATG CAGGACGCGT GGCGCAGGCT GCCGCGCTGG AGTTGAAGCA GTTCGGGCGG
AGATTGGCGC GGCTGCGATA G
|
|---|
| Protein sequence | MELRHLRYFV AVAEQGNVSR AARKLFIAQP PLSAQLKQLE EEVGAALFTR LPRGVRLTPA
GESLLEDARA ILARAQQAPL RARERQQSRQ GVVRLGLVPS AMHSVLPGLL RRIADAGWNL
RVEAREMITS QQLRALRAGE LDLGFGRPGK GEPLAEEVAG MDDPYCLAMA PSHPLAAGEG
ALPLQSAAHE PFVGFARYED ADYFDRTVAL CLDAGFTPSI RHEAGQFVNV LALVACGLGV
AIVPSSFASL YRGKLVFRPL QQSRYQSRLA VLAVAGSTDG ESDAGRVAQA AALELKQFGR
RLARLR
|
|---|
| |