| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4502 |
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| Symbol | |
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| ID | 5750090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4926298 |
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| End bp | 4927680 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641299603 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001565516 |
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| Protein GI | 160899934 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0157503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGATG AGCCTTTGCC CCTCTGGTTG CCGCAACTGG CCGTGCAGGG CGGCCCCCGA
TTCCTGCAGA TCGCCGATGC CTTGCAGGCA GCGGTGGCAG ACGGATCGCT GAAGCCCGGT
GACCGCCTGC CCCCACAACG CCGGCTGGCT GCCCAGCTGG ATGTGGACCT GACGACGGTC
ACGCGCGCCT ACGACGAAGC CAGGCGCCGC CAGCTGCTGG AGGGACGCGG CGCCAGAGGC
ACCTATGTCG CGGCGCCCAA GGTGGAGCTG AACGCCGTGC TGGACCTGAG CATGAACACC
CCGCCACCGC CGGCTGGCGT GGACCTGGAC GACATGTTGA AGCAGGGCCT GGCGCAAGTG
CTGATGGGTG CGGATGCCCA GTTGCTGATG ACCTACCACC TGGGCGGGGG AAGCGACTCC
GACCGCAAGG CGGGCGCCAG GTGGCTGCAG CCCATGTTCG GAGATGTGGA TGCCCGGCAG
CTGGTGGTCT GCCCGGGCGC GCAGGCGGCG ATTGCCGCCC TGGTGCTTGC GCTGACGGAG
CCGGGCGATG TGATCCTGAC CGAGCCCACC AGCTATCCCG GCCTGCGTGC CGCAGCGGCC
CAGTTCGGCC GGCGCATCAT TGCGGTGCAA GCGGACAGCC AGGGGATCAT GCCCGAGCGG
CTTGAGCAGG CATGCCGACA GCACAGGCCC GGGCTGGTCT ACCTGAACCC CACGCTGCAG
AACCCGACCG CCATCACGCT TGCCGAGGAC CGGCGCCAAG AGATCGCCAG CATCGCAAAG
CGCTGCCATG TGCGCATCGT CGAGGACGAT CCCTACTGGC TGCTGGCCGA TGCCCCGCCG
CCGCCGATCG CCAGGTTTGC CCCGGAGCAG GTGTACTACA TCTCCACCCT CTCGAAATGC
CTGACGCCCG GTTTGCGGGT GGCCTTCGTG CTCCTGCCTG ACCCGCACGA GCGCCAGCGT
TTCCTGGTCG CGCTGAGATC GTTTGCGCTG ATGGCCACGC CGCTGACGGC CGCCCTGGCC
ACGCAGTGGA TCCTCGACGG CTCGGCCGGA AAATTGATGG AAGGCGTGCG CAAGGAGGCG
CGCCTGCGCC ACCGGATGGC CAGGGATGTG CTGGCCGGCC GGTACAGCGG CGCGGGAGAC
GGCCTGCATG TATGGCTGGA GCTGCCGAGT TACTGGAGCC CCTCGCAGCT TGCGCGTGCC
GCCGACAGCG AGGGCATCGC CGTCACGCCG GCACAGGCCT TCGCCACCGG CGGCGAATCC
GTGAATGCCA TCCGCATCTC CCTGGGCAGC ATCAAGGACC GTGGACGCCT GCAGGCGGGC
CTTCAACGGC TGTCGCATCT GCTTGCGCGC CTGCCCGAGT CGTTCAGCGC CGCCGTGGTC
TAG
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| Protein sequence | MQDEPLPLWL PQLAVQGGPR FLQIADALQA AVADGSLKPG DRLPPQRRLA AQLDVDLTTV
TRAYDEARRR QLLEGRGARG TYVAAPKVEL NAVLDLSMNT PPPPAGVDLD DMLKQGLAQV
LMGADAQLLM TYHLGGGSDS DRKAGARWLQ PMFGDVDARQ LVVCPGAQAA IAALVLALTE
PGDVILTEPT SYPGLRAAAA QFGRRIIAVQ ADSQGIMPER LEQACRQHRP GLVYLNPTLQ
NPTAITLAED RRQEIASIAK RCHVRIVEDD PYWLLADAPP PPIARFAPEQ VYYISTLSKC
LTPGLRVAFV LLPDPHERQR FLVALRSFAL MATPLTAALA TQWILDGSAG KLMEGVRKEA
RLRHRMARDV LAGRYSGAGD GLHVWLELPS YWSPSQLARA ADSEGIAVTP AQAFATGGES
VNAIRISLGS IKDRGRLQAG LQRLSHLLAR LPESFSAAVV
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