| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4491 |
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| Symbol | |
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| ID | 5750079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4913826 |
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| End bp | 4915421 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641299592 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001565505 |
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| Protein GI | 160899923 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAGGG ATTGGTGGAC AAAGGCCTGG TGCGGGGGCA GAGGCCGGCC CGTGAAGCGT
GATGCCCGCC TGGTGGCCTG GTTGCTGGCG GTGGTGTTCG TATCGGTTTC TGCGGCCACG
GTCTGGCAAT TGGTGGCGGC GCGCCAGCGC ACGCTGGCCG AGGTCGATAC CAGCAACCGC
AACCTGGCCC AGACACTGAA CACCTATGCC GAGGGCGTGA TCACCCAAAG CTCCATGCTG
CTGCTGGGCA TTGCCGAGCG GCTGGAGGTG GATGGCACCA GCCCCGTGCT CCTGGAGCGG
GTGCTGTATC TGGTCAACCG GCAGGAGCAG CTGCTGAACC AGCTCAACGA GCTGCTGATC
GTGGATGCGC AGGGCCATTG GCTGATGTCG TCCAAGGGCG TGTTTCCCGA AGGATCGGAA
AGCTCCGGCC TGGACTACTT CACGCACCAC CGTGACGACG CATCGTCAGG CATCTACATC
GGGCCGCCGA TCCGCAGCCG CTCCACGGGC GAATGGGTGA TCACCATCAG CCGGCGCTAT
ACGGACGCCG AGGGCCAGTT TGCAGGCGCG GTGGTGGTGG CGCTGGGTGT GGAGAATTTC
CTGCGGCTGT TCGGCAAGAT CGATATCGGC GAGAAGGGGG CCATTGCACT GAGCACGCCG
GGCGGGCAGT TGCTGGTGCG CCACCCGTTC CGCGAGCAGG ACCTGGGGCG GGACTTCTCG
CAGTCGCCCA ATTTTCTGCG CCACTACGTG GGGGCGATGT CGGGCACGGC GTCGTTCCGC
TCGGCCCTGG ATGGCACGGA AAGAATCTAT GCCTTCCTGC GCAGCGAGCG CTATCCCCTG
GTGACCACGG TGGCCCTGGG CCGCGATGAG GCGTTGAGCT CCTGGCGGCG CCAGGCGCTG
CTGACGCTGG CCGTGGTGCT GGGGCTGTTT CTGGCGATTG CGTTGATCGG CTGGCGCCTG
ACGGCCGCGA TGCGGCTGCG TTCGCGCGCC GAATGCTCCC TGGTCAGCGC GCGCGAGGAA
TTGCTGGACG CCAATCGCCG GCTGGAAGTG CTGGCTGCCC AGGACCAGCT GACGGGCCTG
GCCAACCGCC GCCGCTTTGA CGAGGTGCTG GAGCGCGAGG CCCGTCGCGC TGCGCGCGAG
GGCACGCCGC TGTCGCTGCT GCTGATCGAC CTGGACTACT TCAAGGGCTA CAACGATGCC
TACGGCCATG TGGCGGGCGA TGCCTGCCTG CAGGCCGTGT GCAGCGCGCT GGCCCAGGCG
GTGCAGCGGC CCGGCGACAT GGCGGCGCGC TATGGCGGGG AGGAGCTGGC CGTGGTGCTG
CCCAATACCG ACAAGGCCGG CGCGCAGCAG GTGGCCGAGC GGCTGCGCGC GCGCATCGAG
GGCCTGGCCC TGGAGCACCG CATCAGCCGC TTTGGCCATG TGACGGCCAG CATTGGCGTG
GCCACGGCGC AGGGCGATGA GGCTGGCGCG ACCCAAGGCG CTACACAAGG CACCACGCAA
GGCTCCACCC AAGGTGCCGC CGTGGCGCTG GTGGAAGCGG CCGACCGTGC GCTGTACCGC
GCCAAGGCCG CAGGGCGCAA CTGCGTGCAG GGCTGA
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| Protein sequence | MERDWWTKAW CGGRGRPVKR DARLVAWLLA VVFVSVSAAT VWQLVAARQR TLAEVDTSNR
NLAQTLNTYA EGVITQSSML LLGIAERLEV DGTSPVLLER VLYLVNRQEQ LLNQLNELLI
VDAQGHWLMS SKGVFPEGSE SSGLDYFTHH RDDASSGIYI GPPIRSRSTG EWVITISRRY
TDAEGQFAGA VVVALGVENF LRLFGKIDIG EKGAIALSTP GGQLLVRHPF REQDLGRDFS
QSPNFLRHYV GAMSGTASFR SALDGTERIY AFLRSERYPL VTTVALGRDE ALSSWRRQAL
LTLAVVLGLF LAIALIGWRL TAAMRLRSRA ECSLVSAREE LLDANRRLEV LAAQDQLTGL
ANRRRFDEVL EREARRAARE GTPLSLLLID LDYFKGYNDA YGHVAGDACL QAVCSALAQA
VQRPGDMAAR YGGEELAVVL PNTDKAGAQQ VAERLRARIE GLALEHRISR FGHVTASIGV
ATAQGDEAGA TQGATQGTTQ GSTQGAAVAL VEAADRALYR AKAAGRNCVQ G
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