Gene Daci_4484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4484 
Symbol 
ID5750072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4907540 
End bp4908253 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content69% 
IMG OID641299585 
ProductABC transporter related 
Protein accessionYP_001565498 
Protein GI160899916 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAAA TGCAGGCCGT GCAAAGCGGC TACGGACCCA GCCAGGTGCT GTTCGGCGTG 
GACCTCCGCA TCGAGGCAGG CCAGGTCGTC ACCCTGCTGG GTCGCAACGG CATGGGCAAG
ACCACGCTGC TTCGCACGCT GCTGGGCCAG CTGCCCCTGC GCGCCGGCCG CATGGTGTTT
GCCGGGCAGG ACATTGCCGG CTGGGCCACC GACCGCATCG CCCGCGCCGG CGTGGCCATC
GTGCCCGAAG GCCGCCAGTG CTTTCCCAAT CTCACGGTGC GCGAGCACCT GACGGCCTTT
GTGGCCCATC GCAATTCGGG CAGCCCCGGC GCGGCCCAGC CCTGGACGCC CGAGCGCGTG
TTCCCGCTGT TCCCCCGCCT GCGCGAGCGC GCCTCCAACA TGGGTAACCA GCTGTCAGGC
GGCGAGCAGC AAATGCTGGC CATAGGCCGC GCCCTGGTCA CCAACCCGCG CCTGCTCATC
CTGGACGAAG CCACCGAGGG CCTGGCCCCC CGCATCCGCG AAGAGATCTG GGCCTGCCTG
GCTCAGCTGC GCGCCGCCGG CCAGACCATC CTGGTCATCG ACAAATACGT GGAGCGCCTG
CTGGGCCTGG CTGACCGCCA CCTCATCCTG GAGCGCGGCA AGGTCGTGTG GAGCGGAGAC
TCGGCCGCGC TGGATGGGGA CAGAGCGCTG TGGGAACGGT ATTTGGGAGT GTGA
 
Protein sequence
MLEMQAVQSG YGPSQVLFGV DLRIEAGQVV TLLGRNGMGK TTLLRTLLGQ LPLRAGRMVF 
AGQDIAGWAT DRIARAGVAI VPEGRQCFPN LTVREHLTAF VAHRNSGSPG AAQPWTPERV
FPLFPRLRER ASNMGNQLSG GEQQMLAIGR ALVTNPRLLI LDEATEGLAP RIREEIWACL
AQLRAAGQTI LVIDKYVERL LGLADRHLIL ERGKVVWSGD SAALDGDRAL WERYLGV