| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4471 |
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| Symbol | |
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| ID | 5750059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4892267 |
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| End bp | 4893079 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641299573 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001565486 |
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| Protein GI | 160899904 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0156103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.420839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGA CTTCACAACC CCTGGAAGGG CGCCATGCCC TGGTGACGGG CGGGGCGCGC
GGCATAGGCC TGGCCTGTGC GCGGGCGCTG CTGGCGCGCG GCGCGCGGGT CACGCTGCTG
GGACGCGATA GTGCGGCGCT GGAGGCTGCC GTGCGCGAGC TGGGCGGCAC GGCACAGGCA
GCACAGGAAG CACAGAAGGT GCAGTCCGTG CAGGCGGATA TTGCCGACGA GGCCTCGGTG
CGCCAGGCCT TCGCGCAGGC CGAGGCGGCC TTCGGCCCCG TGCAGGTGCT GGTCAACAAC
GCGGGCCAGG CCAGCAGCCA GAAGTTCGAG CGCACCGACG CCGCACTGTG GCAGGGCATG
CTGGCCGTCA ACCTCACGGG CACCTTCCAC TGCATGCAGG CCGCGCTGCC GGGCATGCTG
GCTGCGCGCT GGGGCCGCAT CATCAATGTG GCCAGCACGG CAGGGCTGAT CGGCTATGCC
TATGTCAGCG CCTATTGCGC GGCCAAGCAT GGCGTGATCG GCCTCACGCG CTCGCTGGCG
CTGGAGACCG CAGGCAAGGG CGTGACGGTG AACGCCGTCT GCCCCGGCTA TACCGAGACC
GACATCGTGC GCGGCGCCGT GGCCAACATC GTGGACAAGA CCGGCATGAC GGCGGATGAG
GCCCGCGCCA GGCTGGCCGA ACGCAACCCG CAGGGCCGCC TGGTCCAGCC CGAGGAAGTG
GCCGAGACCG TGGCCTGGCT GTCCCTGCCG GCGTCCGCCT CGGTCAACGG CCAGTCCATT
GCCGTCGACG GCGGCGAGGT GATGACCGGC TGA
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| Protein sequence | MTMTSQPLEG RHALVTGGAR GIGLACARAL LARGARVTLL GRDSAALEAA VRELGGTAQA
AQEAQKVQSV QADIADEASV RQAFAQAEAA FGPVQVLVNN AGQASSQKFE RTDAALWQGM
LAVNLTGTFH CMQAALPGML AARWGRIINV ASTAGLIGYA YVSAYCAAKH GVIGLTRSLA
LETAGKGVTV NAVCPGYTET DIVRGAVANI VDKTGMTADE ARARLAERNP QGRLVQPEEV
AETVAWLSLP ASASVNGQSI AVDGGEVMTG
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