| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4468 |
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| Symbol | |
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| ID | 5750056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4888510 |
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| End bp | 4890150 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641299570 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001565483 |
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| Protein GI | 160899901 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.136925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCCT CCGCCCACAT CGATACTTTC GCCCGGGACA ATCTGCCGCC GCCCGACCAA
TGGCCCGAGT TCCTGCTCGA CGGGCCGGAC GTGGCCTATC CCGAACGCCT GAACTGCGCG
GCCGAACTGG TCGATGCCAT GGTGGCGCGC GGCCAGGGCG GGCGCGTTGC CCTGCGCTGG
AGGCAGGGCG CGGACCAGGC CGCCATGACC TATGCCGAAC TGCAGGCACT GACCAACCGC
ATCGCCCATG TGCTGGTGGA AGACCTGCAG CTGGTGCCCG GCAACCGGCT GCTGCTGCGC
GGCCCCAACA ACGCCATGAT GGCCGCGTCC TGGCTGGCCG CCATCAAGGC CGGGCTGGTG
ACGGTGCCCA CCATGCCGCT GCTGCGTGCC AAGGAGCTGC AGCAGATCAT CGCCAAGGCC
CAGGTGCAGG CCGTGCTGTG CGATGTGCGC CTCAAGGACG AAGTGCAGCT GTGCCTGCAG
CCCGGCCATG AACACCATTG CCCGGGCCTT TCGCGCGTGC TGTATTTCAA CGACGGCGCA
GCCGATGCGC TGGACGCCCT GGCCGCAGCC AAGCCCGACA CCTTTGCCTG CTGCGATACA
TCGGCAGACG ATGTCTGCCT GATCGCCTTC ACCAGCGGCA CCACGGGCGC GCCCAAGGGC
TGCATGCATT TCCACCGCGA CGTGCTGGCC ATGTGCGACC TGTTCCCGCG CCATGTGATC
CGGCCTGGCC CGGACGACAT CTTCTGCGGC ACGCCGCCGC TGGCCTTCAC CTTTGGCCTG
GGCGGGCTGC TGTGCTTTCC GCTGCGCGTG GGCGCCAGCA CCGTGCTGGC CGAAAAGCTC
ACGCCCGAAG GGCTGCTGCA GCTGGTGCAG GATTTCCGCG CCACCATTGT CTTCACCGCG
CCCACCTTCT ACCGGCAGAT GGCGGCGCAG GCAGCGCGCT TCGACCTGTC GTCGCTCAGG
AAAAGCGTGT CGGCCGGCGA GGCCCTGCCG GACGCCACGC GCCAGCTGTG GAAGCAGGCC
ACGGGCATCG AGATGATCGA CGGCATCGGC GGCACCGAGC TCATCCACGT CTTCGTGTCC
AGCCCGCCCG AGGAGGTGCG CGCAGGCGCC ATCGGCAAGG TCGTGCCCGG CTACGTGGCC
CAGGTGGTGG ACGACGACAT GCAGCCCGTG CCCGACGGCA CGCCCGGCCG CCTGGCCATC
AAGGGACCGA CCGGCTGCCG GTATCTTGCA GACGAGCGCC AGAAGCGCTT TGTGCAAAAC
GGCTGGAACC TGCCCGGCGA CACCTTTGTG CGCGACGCCG ACGGTTATCT GTTCTACCAG
GCGCGCAATG ACGACATGAT CATCTCGGCC GGCTACAACA TTGCCGGCCC CGAGGTGGAG
GATGCGCTGC TGCGCCACGA GGCCGTGGCC GAATGCGGCG TGATCGGCGC GGCAGACGAC
GAGCGCGGCC AGGTGGTCAA GGCCTTTGTG GTGCTCAAGC CCGGCTTTGC GGCCGGCGAC
GACATGGCCG CCACGCTGCA GGCCTTCGTC AAGGCCAGCA TTGCGCCCTA CAAGTACCCG
CGCGCCATTG TCTTCGTGCC GGCCCTGCCG CGCACCGAGA CCGGCAAGCT GCAGCGATTC
GTGCTGCGCA AGATGCCGTG A
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| Protein sequence | MQASAHIDTF ARDNLPPPDQ WPEFLLDGPD VAYPERLNCA AELVDAMVAR GQGGRVALRW
RQGADQAAMT YAELQALTNR IAHVLVEDLQ LVPGNRLLLR GPNNAMMAAS WLAAIKAGLV
TVPTMPLLRA KELQQIIAKA QVQAVLCDVR LKDEVQLCLQ PGHEHHCPGL SRVLYFNDGA
ADALDALAAA KPDTFACCDT SADDVCLIAF TSGTTGAPKG CMHFHRDVLA MCDLFPRHVI
RPGPDDIFCG TPPLAFTFGL GGLLCFPLRV GASTVLAEKL TPEGLLQLVQ DFRATIVFTA
PTFYRQMAAQ AARFDLSSLR KSVSAGEALP DATRQLWKQA TGIEMIDGIG GTELIHVFVS
SPPEEVRAGA IGKVVPGYVA QVVDDDMQPV PDGTPGRLAI KGPTGCRYLA DERQKRFVQN
GWNLPGDTFV RDADGYLFYQ ARNDDMIISA GYNIAGPEVE DALLRHEAVA ECGVIGAADD
ERGQVVKAFV VLKPGFAAGD DMAATLQAFV KASIAPYKYP RAIVFVPALP RTETGKLQRF
VLRKMP
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