| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4462 |
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| Symbol | |
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| ID | 5750050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4883072 |
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| End bp | 4885345 |
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| Gene Length | 2274 bp |
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| Protein Length | 757 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641299564 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001565477 |
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| Protein GI | 160899895 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0705188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTGT TTGCGCGCGC CGGCTGTGGA TGCCGGCGGC ATGCGCCTGT GCCCGTTTTC
ACCATGACTG CTTTCTTCTT CCCCGCGAAG CCGCTTCCCC GCCTTCGCCC GCTGCCGCTT
GCCCTGAGCG CTGCCGCCTT CCTGTCCATG CCCGCACTGG CCCAAGGCCA GGATCCGTCC
TCCGGCCCCG CCCCCGCCGC CGCCACCGCC GCCTCCGCTT CCCCGCAGGA GCAGGTGCTG
CTGCCTGCCG TGGAAGTCGT GGGCCGAACG GCCTCGGGCG CCTATCACAC CGACGAGGCG
GCCGGCGCCA AGACCGACCT GCCGCTGCGC GAGCTGCCGC AGTCGGTGCG CGTGATCACG
CGCCAGGCCA TGGACGACCT GGGCGCCACC AAGCTTGACG ACGTGCTGGA CTACGTGGGC
GGCGTCTCGC GCCAGAACAA CTTTGGCGGG CTGTGGGACA ACATCGTCAT CCGCGGCCTG
CCCGGCGACC AGAACGTGGG CATGGCCACC CTGTTCAACG GTTTTTCCTC GGGGCGCGGC
TTCAATGCGC CGCGTGATCT GGCCGGCGTG GAGCGCATCG AGTTCCTCAA GGGCACGGCC
GCTGCGCTCT ACGGTAGCAG CGAGCCGGGC GGCACGCTGA ACGTCGTCTC CAAGCGCCCG
CTGTGGACGT CTTCGCATTC CGTGGAAGCC TATGCGGGCA GCTACGGCCT GCGGCGTGGC
GCGCTGGACA CCACGGGACC GGTGGGCGAG AACTTTGCCT ACCGGCTCAA CATCGCCGTG
GAGGACCGCG ACAGCTTCCG CGATTTCGTG GGCGCCAGCC GCCAGGTGAT CGCACCGGCC
TTCACCTGGA AGCTGGGGCG CGATACGGTG CTGGAGTACT CGGGCGAGCT GCTGCGCCAC
AAGACGCCGC TGGACCGCGG CGTGGTGGCC GTGGGCGACC GGCTGGGCGC CATCTCGCGC
AGCCGCTTCC TGGGCGAGCC GGGCGACGGC GATGTGACGG TGGAAAACCG CACCCACCAG
TTCATCCTCT CGCACGAGTG GAACGCGCAG TGGCGCAGCC GCCTGGGCCT GTCCTATCGC
GAAACCTCGA TCAACGGCTT TTCCACCGAA CCCCACGCGC TGCTGGCCAA TGGCGACCTC
ACGCGCCAGC GGCGTTTCCG CGACTACCAG TCCGACGATA TCGCCGTGCA GGCCGAGCTG
CAGGGCACGG TGAAAACGGG CGCCGTCGAA CACGAGCTGC TGCTGGGCCT GGAGAGCTTT
CGCTTCGAGA TGGACACGCT GATGCTGCGC GCCAACCCGA CGGCGGCCAA TCCCTACGCC
ATCAACATCT ACAACCCCAT CTACGGCGGC GCGCGCCCCG TGCCCACGGC CAACACCGAC
ACCTTCGAGC GGCAGCGCAA CACGGCCTTC TACCTGCAGG ACGCCATCAA GCTCTCGCCC
CAATGGCGCG TGGTGGCCGG CCTGCGCATG GACCGTTACG ACCAGTCGCT GCACAACCGC
CGCACGGGGG CGACCACGCA GCAGGACCCG GCCTCGACCT CGCCGCGCTT GGGCCTGAGC
TGGCTGCCGC TGCCGCAATG GACCTTCTAT GCCAACGCGG GCCGCTCGTT CCGGCCCAAC
GTGGGCATCG ATGTGGCCGG TGCGGGCTTC AGCCCGGAAT CCGGCCGTTC CATGGAGCTG
GGCGCCAAGT GGGAAAGTGC CGACCAGCGC ATGGGTGCCA CGGCCGCGCT GTTCGACATC
CGCAAGCGCA ATGTGCTGAC GGCCGACCCG GGCAACGCCG GCTATTCGGT CTCGGCCGGC
GAGATCCGCA GCCGGGGCCT GGAATTCGAC TTCGCCGGCC AGGTCACGCA GCGCTGGCGC
CTGAATGCGA GCCTGGTGCT CAACGATGTA GAGATCTCCC GCGACAACAC GCTGGAGGTG
GGCGGGCGCC TGCTCAACGT GCCCAAGGTC AACGGCAGCG TGCTGGCGGT CTACGAGAAC
GCCTTCTCCA ACGGCCAGCG CTACGGCATC GGCGGCGGCG TCACCCACAT GGGCAAGCGC
CTGGGCCAGG CCCGCACGCA GGCCGAGGCC GATGCCGGCA AGGCCGCCTT CGAGCTGCCC
AGCTACACCA CGGCCAAGCT GGTTGCCTAC TGGCGCATCA GCCCCACGCT GCGCCTGACG
CTGGACGTGG ACAACCTCTT CGACAAGACC TACTACACCA GCTCGTACAG CCGGCTGTGG
GTGACGCCGG GCACGGCCCG CACCGTCACC GTAGGCCTTC AAGCAAAGTT CTGA
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| Protein sequence | MSVFARAGCG CRRHAPVPVF TMTAFFFPAK PLPRLRPLPL ALSAAAFLSM PALAQGQDPS
SGPAPAAATA ASASPQEQVL LPAVEVVGRT ASGAYHTDEA AGAKTDLPLR ELPQSVRVIT
RQAMDDLGAT KLDDVLDYVG GVSRQNNFGG LWDNIVIRGL PGDQNVGMAT LFNGFSSGRG
FNAPRDLAGV ERIEFLKGTA AALYGSSEPG GTLNVVSKRP LWTSSHSVEA YAGSYGLRRG
ALDTTGPVGE NFAYRLNIAV EDRDSFRDFV GASRQVIAPA FTWKLGRDTV LEYSGELLRH
KTPLDRGVVA VGDRLGAISR SRFLGEPGDG DVTVENRTHQ FILSHEWNAQ WRSRLGLSYR
ETSINGFSTE PHALLANGDL TRQRRFRDYQ SDDIAVQAEL QGTVKTGAVE HELLLGLESF
RFEMDTLMLR ANPTAANPYA INIYNPIYGG ARPVPTANTD TFERQRNTAF YLQDAIKLSP
QWRVVAGLRM DRYDQSLHNR RTGATTQQDP ASTSPRLGLS WLPLPQWTFY ANAGRSFRPN
VGIDVAGAGF SPESGRSMEL GAKWESADQR MGATAALFDI RKRNVLTADP GNAGYSVSAG
EIRSRGLEFD FAGQVTQRWR LNASLVLNDV EISRDNTLEV GGRLLNVPKV NGSVLAVYEN
AFSNGQRYGI GGGVTHMGKR LGQARTQAEA DAGKAAFELP SYTTAKLVAY WRISPTLRLT
LDVDNLFDKT YYTSSYSRLW VTPGTARTVT VGLQAKF
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