Gene Daci_4461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4461 
Symbol 
ID5750049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4882242 
End bp4883063 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content70% 
IMG OID641299563 
ProductABC transporter related 
Protein accessionYP_001565476 
Protein GI160899894 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0398264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCCAT CCCTTCCTGT TTCTTCCAAC CCCACTTCTG CCTCCACGCC CGTGCTCCAA 
GCGCTGGGCG CCGTGGTGGA CTATGGCGAG CGCACCATCC TCCAGGGCCT GGACCTGGCC
GTGAATGCGG GCGAGATCTA TGCGCTGCTG GGCGCCAACG GCGCGGGCAA GACCACCACG
CTGAGCATGC TGCTGGGCTT TGTGCGGCCG CGCAGCGGAC AGGTGCGCGT GCAGGGCGTG
GACCCGGTGA CGGCGCCTGC GCAGGCGCGT GCCCTGATCG CCTATATCCC CGAGAACGTG
GCGCTGTACG AGCACCTGAG TGCGCGCGAG AACGTGGCCT ACCTGCTGGA GCTGGCGGGC
CAGCCGGCCG CGGCCGGCGC CATCGGCCAG GCGCTGTCTG CCGCAGGGCT GGACGCTGCC
GCGCACGACC GGCGCGTCTC CGGTTTTTCC AAGGGCATGC GCCAGAAGGT GGCGATTGCG
CTGGCGCTGG CGCGCAGGGT GCCGGCGCTG CTGCTGGACG AACCCACCTC GGGCCTGGAC
CCGCAGGCCA CGGCCGAGTT CAGCCGGCTG CTCATGCAGT TGCGCGGGCA GGGCGTGGCC
ATTCTCATGG TCACGCACGA CCTGCTGGGC GCCGCCGACG TGGCCGACCG CATGGGCTTC
ATCGCAGGCG GGCGCCTGGT CGAGGAAGTG GCGGCCAGCG GAGAGGAGCG CTTCGATGTG
CGCGCACTGC ACCGCCACTA TGCAGGGGTG GGCACACACA CGGGCACGGA CACGGACGCG
CACACGCACA TTGAAGCCGA CACGCAGGGG GCAGCGGCAT GA
 
Protein sequence
MHPSLPVSSN PTSASTPVLQ ALGAVVDYGE RTILQGLDLA VNAGEIYALL GANGAGKTTT 
LSMLLGFVRP RSGQVRVQGV DPVTAPAQAR ALIAYIPENV ALYEHLSARE NVAYLLELAG
QPAAAGAIGQ ALSAAGLDAA AHDRRVSGFS KGMRQKVAIA LALARRVPAL LLDEPTSGLD
PQATAEFSRL LMQLRGQGVA ILMVTHDLLG AADVADRMGF IAGGRLVEEV AASGEERFDV
RALHRHYAGV GTHTGTDTDA HTHIEADTQG AAA