Gene Daci_4458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4458 
Symbol 
ID5750046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4878917 
End bp4879342 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content65% 
IMG OID641299560 
Productferric uptake regulator family protein 
Protein accessionYP_001565473 
Protein GI160899891 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.342841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00667855 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTAGAC ACACTCAGCC CATCGTGGAG CGCTTGTTCA GGCCTATGGA ACGCTCGACC 
CGTCAACGCA GCTCGATACG CACGGTCATG GAAGAGGCTG GACGCCCCTT GCTTCCGGCC
GAGATCCTCG GCGCAGCGCA GCGCGAGGTG CCGGCCATCG GGCTGGCCAC GGTGTACCGC
AACATCAAGC AGCTGATGGA AGCGGGCGAA GTGCAGGCCG TGGACCTGCC CGGCGAGGCC
ACGCGCTACG AACTCAGCGG CCGCGCCCAC CACCACCATT TCCGCTGCAT GAGCTGCAAC
CGCGTGTTCA ACGTGCCCGG CTGTCCGGGC GACATGCAGC GCATCGCCCC CGAAGGCTTT
GTGGTGGAGC GCCATGAGAT GACGCTGTAC GGCGTCTGCA GCGACTGCCA CCAGAACGTG
CAATAA
 
Protein sequence
MTRHTQPIVE RLFRPMERST RQRSSIRTVM EEAGRPLLPA EILGAAQREV PAIGLATVYR 
NIKQLMEAGE VQAVDLPGEA TRYELSGRAH HHHFRCMSCN RVFNVPGCPG DMQRIAPEGF
VVERHEMTLY GVCSDCHQNV Q