| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4456 |
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| Symbol | |
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| ID | 5750044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4876903 |
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| End bp | 4877679 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641299558 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001565471 |
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| Protein GI | 160899889 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.968852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00124263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCAGCCAT CGCCACAGCA ACTCCACGGA AAAGTCGCCC TCATCACGGG CGCCAGCTCA
GGCATAGGCC GCGAAGCCGC CAGGCTGTTT GCGCGCCACG GCGCCAGGCT GGTCCTCACG
GCCCGCCGCC AGCCGGAACT GCAGGCCCTG GTGGCGGAGA TCGAGCAGGA CGGCGGCCAG
GCCATCGCGC TGGCCGGCGA CGTGCGGGAC GAGCCGCTGG CACAGGCCCT GGTCGAGACC
GCCACGGAGC GCTTTGGCGG CCTGGACATC GCCTTCAACA ATGCAGGCAT GACCGGCGAT
CCCTGTGCCC TGCCCGATCT CTCGCTGCAG GCCTGGCAGG ACGCCATCGC CACCAACCTC
ACCAGTGCCT TTCTGGGCGC CAAGCACCAG ATACCGGCCC TGCTGGCACG CGGTGGCGGC
TCGCTGATCT TCACCTCCAC CTTCGTGGGC CATACGGCGG GCCTGCCCGG CATGGGAGCC
TATGCCGCCA GCAAGGCCGG CCTCGTCGGC CTCACCCAGG TCATCGCCGC CGAATACGGC
CCCCGCGGCC TGCGCGCCAA CGCCCTGCTG CCCGGGGGCA CCGACACTCC CATGGGCCGC
GCCAGCACCC CCACGCCCGA GGCGCGCGCC TTCGTCGAAA ACCTGCACGC GCTCAAGCGC
CTCGCCACCC CCGCAGAAAT CGCGGCGGCG GCGCTGTTTC TGGCGTCGGA CGCATCCAGC
TTCATCACGG GTACGGCCAT GGTGGTCGAT GGTGGCGTGT CCATCAACCG GATTTGA
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| Protein sequence | MQPSPQQLHG KVALITGASS GIGREAARLF ARHGARLVLT ARRQPELQAL VAEIEQDGGQ
AIALAGDVRD EPLAQALVET ATERFGGLDI AFNNAGMTGD PCALPDLSLQ AWQDAIATNL
TSAFLGAKHQ IPALLARGGG SLIFTSTFVG HTAGLPGMGA YAASKAGLVG LTQVIAAEYG
PRGLRANALL PGGTDTPMGR ASTPTPEARA FVENLHALKR LATPAEIAAA ALFLASDASS
FITGTAMVVD GGVSINRI
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