Gene Daci_4453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4453 
Symbol 
ID5750041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4873877 
End bp4874887 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content70% 
IMG OID641299555 
Producthypothetical protein 
Protein accessionYP_001565468 
Protein GI160899886 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00304817 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATTCCC TGTCCAGACG CACCGCCAGC CTGTGGGCGG CAGCAGGCCT GCTTTCGGCC 
GTTGCCGGCA TGGCCGCGCC GGCCGCTGCG GCTGCAGCGG CTGCAGTGGC CAACTACCCC
GAGCGCCCCG TCACCCTGGT CGTAACCTAT CCGCCGGGCG GCACCGTCGA TGTGGTGGCG
CGCCTGATCG GCCCCAGGCT GTCTGCCGAG CTGGGCCAGC CCGTGGTGAT CGAGAACCGG
GGCGGGGCAG GCGGCATGAT TGGCGGTGCC CAGGTGGCCA AGGCCCAGCC CGACGGCTAC
ACGCTGATGC TCGATGCCTC CAACCACGCG CAAAACCCCG CCATCCACGC GCGCATGCAG
TTCGACACGC TCAAGGCCTT CGCGCCCGTG TCGCTGCTGC TGCGCGTGCC CAATGTGCTG
GTGGTTGCGC CTTCGTCGCC CATCAAGAGC GTGCAGGACC TGATCCAGGC CGGCCGCTCC
GAGGGGGGCG GGCAACTGTA CTTTGCGTCC GCAGGCCCGG GCTCGGCCCA GCACCTGGCG
GGCGAACTGT TCAACCTGCT GGCCAGGACG CAGCTGCACC ATGTGGCCTA CAAGGGCGGC
GGCCCGGCCA TGATGGATGT GATGTCGGGC CAGGTGCCGC TGATGTTTGC CAGCATGGGC
TCGGCCTGGC AGCACGTGAA GACCGGCAAG CTGCGCGCGG TGGCCGTGGG CGGGCTGGAG
CGCTCCAAGG CCGCGCCCGA GCTGCCGACC ATTGCCGAGT CGGGCGTGCC CGGCTACGAG
ACCTATGAAT GGAACGCCAT CTTTGCGCCG GCCGGCACGC CGCCCGCCAT CGTGAACCGG
CTGTCCACGG TGCTGGCCAA GGTGCTGCGC GAGCCCGCCA TCGTGGAGCG GCTCGCTGGC
ATAGGCGCCG AGCCCATAGG CTCCACGCCG GCCGAGCTGG AGACCTTCCG CCGCGCCGAG
ATCGCCAAAT GGCAGAAGGT GGTGAAGGAT TCGCGGCTCA AGCTGGACTG A
 
Protein sequence
MNSLSRRTAS LWAAAGLLSA VAGMAAPAAA AAAAAVANYP ERPVTLVVTY PPGGTVDVVA 
RLIGPRLSAE LGQPVVIENR GGAGGMIGGA QVAKAQPDGY TLMLDASNHA QNPAIHARMQ
FDTLKAFAPV SLLLRVPNVL VVAPSSPIKS VQDLIQAGRS EGGGQLYFAS AGPGSAQHLA
GELFNLLART QLHHVAYKGG GPAMMDVMSG QVPLMFASMG SAWQHVKTGK LRAVAVGGLE
RSKAAPELPT IAESGVPGYE TYEWNAIFAP AGTPPAIVNR LSTVLAKVLR EPAIVERLAG
IGAEPIGSTP AELETFRRAE IAKWQKVVKD SRLKLD