Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4453 |
Symbol | |
ID | 5750041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 4873877 |
End bp | 4874887 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641299555 |
Product | hypothetical protein |
Protein accession | YP_001565468 |
Protein GI | 160899886 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00304817 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAATTCCC TGTCCAGACG CACCGCCAGC CTGTGGGCGG CAGCAGGCCT GCTTTCGGCC GTTGCCGGCA TGGCCGCGCC GGCCGCTGCG GCTGCAGCGG CTGCAGTGGC CAACTACCCC GAGCGCCCCG TCACCCTGGT CGTAACCTAT CCGCCGGGCG GCACCGTCGA TGTGGTGGCG CGCCTGATCG GCCCCAGGCT GTCTGCCGAG CTGGGCCAGC CCGTGGTGAT CGAGAACCGG GGCGGGGCAG GCGGCATGAT TGGCGGTGCC CAGGTGGCCA AGGCCCAGCC CGACGGCTAC ACGCTGATGC TCGATGCCTC CAACCACGCG CAAAACCCCG CCATCCACGC GCGCATGCAG TTCGACACGC TCAAGGCCTT CGCGCCCGTG TCGCTGCTGC TGCGCGTGCC CAATGTGCTG GTGGTTGCGC CTTCGTCGCC CATCAAGAGC GTGCAGGACC TGATCCAGGC CGGCCGCTCC GAGGGGGGCG GGCAACTGTA CTTTGCGTCC GCAGGCCCGG GCTCGGCCCA GCACCTGGCG GGCGAACTGT TCAACCTGCT GGCCAGGACG CAGCTGCACC ATGTGGCCTA CAAGGGCGGC GGCCCGGCCA TGATGGATGT GATGTCGGGC CAGGTGCCGC TGATGTTTGC CAGCATGGGC TCGGCCTGGC AGCACGTGAA GACCGGCAAG CTGCGCGCGG TGGCCGTGGG CGGGCTGGAG CGCTCCAAGG CCGCGCCCGA GCTGCCGACC ATTGCCGAGT CGGGCGTGCC CGGCTACGAG ACCTATGAAT GGAACGCCAT CTTTGCGCCG GCCGGCACGC CGCCCGCCAT CGTGAACCGG CTGTCCACGG TGCTGGCCAA GGTGCTGCGC GAGCCCGCCA TCGTGGAGCG GCTCGCTGGC ATAGGCGCCG AGCCCATAGG CTCCACGCCG GCCGAGCTGG AGACCTTCCG CCGCGCCGAG ATCGCCAAAT GGCAGAAGGT GGTGAAGGAT TCGCGGCTCA AGCTGGACTG A
|
Protein sequence | MNSLSRRTAS LWAAAGLLSA VAGMAAPAAA AAAAAVANYP ERPVTLVVTY PPGGTVDVVA RLIGPRLSAE LGQPVVIENR GGAGGMIGGA QVAKAQPDGY TLMLDASNHA QNPAIHARMQ FDTLKAFAPV SLLLRVPNVL VVAPSSPIKS VQDLIQAGRS EGGGQLYFAS AGPGSAQHLA GELFNLLART QLHHVAYKGG GPAMMDVMSG QVPLMFASMG SAWQHVKTGK LRAVAVGGLE RSKAAPELPT IAESGVPGYE TYEWNAIFAP AGTPPAIVNR LSTVLAKVLR EPAIVERLAG IGAEPIGSTP AELETFRRAE IAKWQKVVKD SRLKLD
|
| |