Gene Daci_4452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4452 
Symbol 
ID5750040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4873174 
End bp4873791 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content71% 
IMG OID641299554 
Producthypothetical protein 
Protein accessionYP_001565467 
Protein GI160899885 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00868877 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAACGGGT TCTTACACCT TTTCAGGCGC AGCGGTCCAC GCGGCCCCGC GCGCTTGGTA 
GAAACGGGGC CTTTCCTGTT TCACCCAATT CAAAAGAACA TGGCCCTGCT CACCTTGCGA
ACCACCTTGC GCGCCGCGGC CGCCTTTGCG CTGGCCTGCT CGGCCCTTGC GGCCCAGGCG
CAGACCTACA TCAGCGGCTC GGTCTCGGGC CAGCTGGCAC CGGGCGTCTA CGGCACCGTG
GACATCGGCA ACGCGCCGCC GCCAGCGCTG CTGTACCAGC GCCCCGTCAT CATTGCGCCG
GCCCCCATGG CTCCGCCGCC TGTCTACATG TGGGTGCCCC CGGGCCACGC CAAGCACTGG
GGCAAGCACT GCGCCCGCTA CGGCGCCTGC GGCCGCCCGG TGTACTTCCT GCGCAACCCG
CCGCCGCACT GGCATGCCGG GCCGCCGCGT CCCGATCCGC GCTGGCGCGA GGAGCGCCGC
CACCGCGAAT GGGAGCACCG CCGCGATGAC CGCCGCTGGG ACCGTGACGA CCGCCACGAT
CGCCATGGCG GGCGTGGTGA TGACCACCGT GGCCCCGGGC ATGGCCATGA TCGCGGCCGG
GGCCATGGCC GCGATTGA
 
Protein sequence
MNGFLHLFRR SGPRGPARLV ETGPFLFHPI QKNMALLTLR TTLRAAAAFA LACSALAAQA 
QTYISGSVSG QLAPGVYGTV DIGNAPPPAL LYQRPVIIAP APMAPPPVYM WVPPGHAKHW
GKHCARYGAC GRPVYFLRNP PPHWHAGPPR PDPRWREERR HREWEHRRDD RRWDRDDRHD
RHGGRGDDHR GPGHGHDRGR GHGRD