Gene Daci_4447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4447 
Symbol 
ID5750035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4867662 
End bp4868579 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content67% 
IMG OID641299549 
Productamidohydrolase 2 
Protein accessionYP_001565462 
Protein GI160899880 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0655397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0912133 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTT TTGAAAAAAC CCCCGGCTGG CTGGACTGGT ACGCCGGCCC CTCCAAGCCC 
AAGTTCCAGG TGCCTGCAGG CGCTGTGGAT GCCCACTGCC ACGTCTTCGG CCCCGGCGAT
GAATTCCCGT TTGCGCCCGA GCGCAAGTAC ACGCCCTGCG ACGCCAGCAA GCAGCAGCTG
TTTGCGCTGC GCGACCACCT GGGCTTTGCG CGCAACGTCA TCGTGCAGGC CACCTGCCAC
GGCGCCGACA ACCGCGCCAT GGTCGATGCC TGCAAGGCCG CCAACGGCAA GGCGCGCGGC
GTGGCCACGG TGCGCCGCAG CGTGACCGAT GAGGAGCTGC AGGAGCTGCA CGCCGCCGGC
GTGCGCGGCG TGCGCTTCAA CTTCGTCAAG CGCCTGGTGG ACTTCACGCC TAAGGACGAG
CTGATGGAGA TCGCGGGCCG CATCGCCAAG CTCGGCTGGC ATGTGGTCAT CTACTTCGAG
GCCGTGGACC TGCCCGAGCT GTGGGACTTC TTCACCAGCC TGCCCACCAC CGTGGTCGTG
GACCACATGG GCCGCCCCGA CGTGAGCAAG CCCGTGGACG GCCCCGAGTT CGAGCTGTTC
CTCAGGTTCA TGCGCGAGCA CCAGAACGTC TGGAGCAAGG TCAGCTGCCC CGAACGCCTG
TCCGTCACCG GCCCCAAGGC GCTGGACGGC GAGCAAAATG CCTACCGTGA CGTGGTGCCC
TTCGCCCGCC GCGTGGTCGA GGAGTTCCCC GACCGCGTGC TGTGGGGAAC CGACTGGCCC
CACCCCAACC TCAAGGACCA CATGCCCGAT GACGGCCTGC TGGTCGACTT CATCCCGCAC
ATTGCACCGA CTGCCGAGCT GCAGAAGAAG CTGCTGGTCG ACAATCCGAT GCGCCTGTAC
TGGCCGGAAG AAGCCTGA
 
Protein sequence
MSAFEKTPGW LDWYAGPSKP KFQVPAGAVD AHCHVFGPGD EFPFAPERKY TPCDASKQQL 
FALRDHLGFA RNVIVQATCH GADNRAMVDA CKAANGKARG VATVRRSVTD EELQELHAAG
VRGVRFNFVK RLVDFTPKDE LMEIAGRIAK LGWHVVIYFE AVDLPELWDF FTSLPTTVVV
DHMGRPDVSK PVDGPEFELF LRFMREHQNV WSKVSCPERL SVTGPKALDG EQNAYRDVVP
FARRVVEEFP DRVLWGTDWP HPNLKDHMPD DGLLVDFIPH IAPTAELQKK LLVDNPMRLY
WPEEA