| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4433 |
|---|
| Symbol | |
|---|
| ID | 5750021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 4854390 |
|---|
| End bp | 4855637 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641299535 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001565448 |
|---|
| Protein GI | 160899866 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.944293 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.4083 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTCG CCGATCCCGG CCCGCGCCGC TCCGTTTCCT TCCTCCTGCT GCTGCCGCTG
CTGCTGGCCG CGCAGCCGGT CGCCACCGAT GGCTATCTGC CGGCGTTGCC CGAGATCGCG
CGCGACCTGG GCTCGGCCAG CAGCAGCCTG ACCGTGTTCA TGCTGGCCTT CGGTGTCGCC
CAGCTGGTGT GCGGGCCGCT GGCCGACCGC TTCGGGCGCC GGCCCGTTCT GCTGACGGGT
TTGGCCTGCT ACACGGCAGC GGCGGCAGGC TGTGCGCTGG CGGGCAGCGC GGACGCACTG
GTGGCCTGGC GCGCCGTGCA GGGCGCGGCC ATGGCGGCCA TCCTGGTGTG CGCCCGGGCT
GCGGTGCGCG ACCTGTATCC GGCCCATGAA GGGCCGCGCA TCATGGCCCG CGGCCTCACA
GGCCTGGGGC TGGTGGCCCT GGTGGCGCCG ATTGCCGGTG CATGGGGAGT CCAGGCCACC
GGCTGGCGCT GGGTGCTGGT GGCGATGGGC GTCTACTCGC TGGCTTTGCT GGCACTGTGC
TGGCGCACTT TCAGCGAGAC GCGGCAAGCG CCGGCGGAGT CTGCCCCGGT CCTCGTACCC
GTATCCGTAT CCGCTGGCGG TGTGCGCCAG GTGATCGCCG ACCCCGGCTT TTGCGCCTGG
ACGGCACTGG CCGCAGCCAC CTACGGCGGC ATCTTCTGCT TTTTGCTGCT GTCGCCGATG
GTGTACGTCG ACCTGTTCGG CCTGTCGCCC GTGCTCTACG GCTGGATTCC AGCGGGCGGC
TCGCTGGTCT ACATCCTGGG CATCACATGG TGCCGGCGCC TGCTGTCGCG CCACGGGCCG
GTGCGCACGG TGCAGCTGGG CGCTTCGCTC AGTCTGCTGG GGCCGTGCAT CCAGATCGCC
GGCTGCGTGC TGGCGCCGGC CTCGCCCTTT CCACTGCTGC TGGGGCACGC GGTGTATGCG
CTGGGCCATG GCCTGCACCA GCCTTGCGGC CAGGCGGGCG CGGTGGGTGG CCTGCCGCCG
CAGCTGGCCG GGCGGGCCGT GTCGTGTTCG GGCTTCGCGA TCATGTGCGT GGCCTTCTGC
GCCGGCCAGC TGGCGGCGCA ATTTGTCGAT CCGACAATGC GCCACGGTGC CTGGCCAATG
GTGTTGCCCA TGGCGCTGGC AGGCGTTGTG CTGGTCCTTA TCGCCTTTGT CTGGCTGCCG
TGGCTGTACC GGTTGCGGTC AGCGCAAAGG GTTCAGCCTC GGTCATGA
|
|---|
| Protein sequence | MNFADPGPRR SVSFLLLLPL LLAAQPVATD GYLPALPEIA RDLGSASSSL TVFMLAFGVA
QLVCGPLADR FGRRPVLLTG LACYTAAAAG CALAGSADAL VAWRAVQGAA MAAILVCARA
AVRDLYPAHE GPRIMARGLT GLGLVALVAP IAGAWGVQAT GWRWVLVAMG VYSLALLALC
WRTFSETRQA PAESAPVLVP VSVSAGGVRQ VIADPGFCAW TALAAATYGG IFCFLLLSPM
VYVDLFGLSP VLYGWIPAGG SLVYILGITW CRRLLSRHGP VRTVQLGASL SLLGPCIQIA
GCVLAPASPF PLLLGHAVYA LGHGLHQPCG QAGAVGGLPP QLAGRAVSCS GFAIMCVAFC
AGQLAAQFVD PTMRHGAWPM VLPMALAGVV LVLIAFVWLP WLYRLRSAQR VQPRS
|
|---|
| |