Gene Daci_4432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4432 
Symbol 
ID5750020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4853727 
End bp4854383 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content65% 
IMG OID641299534 
ProductGntR family transcriptional regulator 
Protein accessionYP_001565447 
Protein GI160899865 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.200664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.344729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAAACG TGAAAGACAA GGCGTACGAG GTTCTGCGGC AGCGGCTCAT CGGCGGCCAC 
TACCGACCCG GCGAACAGCT CAAGGAGGAA CCCATTGCCC GCGACCTGGG ACTGAGCCGC
ACGCCGGTGC GCAATGCGCT GCACCGCCTG GTGGAAGATG GCCTGGCCAC CGACGGCGCG
GGCCAGGGTA TCCGCGTGTC GGAGTGGAGC GATTGGGATG TGGAGGAGAC CTTCCAGCTG
CGCATGCTGC TGGAGCCGTA CGCCTCGTTC CTCGCGGCCA CGCGCGGCGG CGAGGGGCTG
GCCGATGAGC TGGAGGCCAG CAACCAGCGC ATGGAGGCCG GCATTGCCGC TGGCCACGAC
GGCATTGGCG AGGTGCAGTC AGCCAACCGG GATTTTCACC ACGCGCTGAT CGAGGCATCG
GGCTCGCCGC GCCTCAAGAC CATGCTGGCG ACGATGATCG ACATGCCGAT CATCAAGCGG
TCGTTCTACA TCTACACGCC CGAAGAGCTG GTGCAAAGCC TGCACCACCA CTGCGACCTG
GTGATCGCCA TACGTGCCAG GGATGGAGAG CTGGCACGCC AGGTGATGCA GCTGCACCTG
CGCATGTCCT ACCACCGGTT CATGAAGCAT CGGGGGGAAT ACCGCGCGGA TGCATGA
 
Protein sequence
MQNVKDKAYE VLRQRLIGGH YRPGEQLKEE PIARDLGLSR TPVRNALHRL VEDGLATDGA 
GQGIRVSEWS DWDVEETFQL RMLLEPYASF LAATRGGEGL ADELEASNQR MEAGIAAGHD
GIGEVQSANR DFHHALIEAS GSPRLKTMLA TMIDMPIIKR SFYIYTPEEL VQSLHHHCDL
VIAIRARDGE LARQVMQLHL RMSYHRFMKH RGEYRADA