Gene Daci_4430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4430 
Symbol 
ID5750018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4851618 
End bp4852604 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content68% 
IMG OID641299532 
Producthypothetical protein 
Protein accessionYP_001565445 
Protein GI160899863 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.840915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.593251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCC CGACCCGACG CCGCCTGGCC CTCGCCGGCC TGCTGGCACT GACCGCTGCC 
GCCATGGCCC CGGCCCATGC CCAGGGCACC TATCCGCAGC GGCCCATCAG GTTCATCGTG
CCCTTTCCGG CCGGTGGCGG CACCGACAAC CTCACGCGGC TGGTCGGCAC CAAGCTCACC
GAGGCCCATG GGTGGGCCAT CGTGGTGGAG AACAAGCCCG GTGCCGGTGG CAACCTGGCT
CTGGACCAGG TGGCCAAGGC CCCCGCCGAC GGCCTGACCC TGGTGATGGC GCAGACCGAC
AACGTGGTGC TCAACCCGCT GCTGTACTCC AAGCTCACCT ACAACCCCGA CAAGGACCTG
CGCGCCGTGG CCCTGGTCGC AGCCGGCCCG GCCGTGCTCG TGGTGAATGC CGATTCGCCG
TACAAGTCCC TGGACGACAT CGTCCAGGCG GCGAAGAAGG ACCCCGGGCG CCTGAGCTTT
GCCACGCCGG GCACCGGCAC CATTTCGCAC CTCATCAGCG AGGCCTGGCA GAAAAGCTCG
AATGTGAAGT TCACCCACGT GCCGTTTCGC GGCATGGCGC AGGCCATGCC CGACCTGCTG
GGCGGGCGCA TCGACATGTA CATGGGCTCC GTCCCCACGC TGCTGTCGCA CATCCAGTCG
GGCAAGGTGC GCGCCATCGG CGTGACCACC GCGAGCCGCT CCAAGCTGCT GCCCGACGTG
CCGACCTACA CCGAATCCGG CATCAAGGGC GTGGAGCTGG CCAGCGTGTG GGGCGTGATG
GCCCCGGCCG GCACCTCCGA CGCCATCGTC AAGCAGCTCA ACGAGGCCAT CAACAAGGTG
GTGAACGCAC CCGACACGGC CAGGAAGATC GCCGACTCCG GCGCCGAACT CATCACCGGC
ACACCGCAGG ACATGGCCAG GCTCTACGCC AGCGACCGCG CACGCCTGGC ACCCATCGTC
AAGAGCTCTG GCACCACGCT CGATTGA
 
Protein sequence
MTTPTRRRLA LAGLLALTAA AMAPAHAQGT YPQRPIRFIV PFPAGGGTDN LTRLVGTKLT 
EAHGWAIVVE NKPGAGGNLA LDQVAKAPAD GLTLVMAQTD NVVLNPLLYS KLTYNPDKDL
RAVALVAAGP AVLVVNADSP YKSLDDIVQA AKKDPGRLSF ATPGTGTISH LISEAWQKSS
NVKFTHVPFR GMAQAMPDLL GGRIDMYMGS VPTLLSHIQS GKVRAIGVTT ASRSKLLPDV
PTYTESGIKG VELASVWGVM APAGTSDAIV KQLNEAINKV VNAPDTARKI ADSGAELITG
TPQDMARLYA SDRARLAPIV KSSGTTLD